Populus trichocarpa (black cottonwood): 7455403
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Entry
7455403 CDS
T01077
Name
(RefSeq) polygalacturonase At1g48100
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
7455403
NCBI-ProteinID:
XP_002320271
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Position
14:7785756..7788807
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AA seq
533 aa
AA seq
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MKDSRVSLLVFGISFICLFLCIQARRHYHAQHHKHSHLHKSSTIPEPPTPPPEPASPPPE
PASPPPEPASPPPVPASPPPEPASPPPEPASPPPVPASPSPEPASPPPVPASPPPVPASP
PPLPANPSGGSGNSTGVFDVRSFGAIGDGITDDTDAFKMAWDAACNQDDSAVILVPYGFE
FMIQSTIFTGPCQGGLVFQVDGTLMPPDGPESWPQKNSRRQWLVFYRINEMSLLGGGVID
GRGEKWWDLPCKPHKGINGTTMPGPCDSPIAIRFFMSSNLTVQGLKIKNSPQFNFRFDNC
KNVHVESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITC
GPSHGISIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQGGSGAVSGITFSNIHMD
NVRNPIIIDQFYCLSKGCTNQTSALSVSDILYENIKGTYNIRSPPMHFACSDSVPCTNLT
LSDVELLPAEGDLVLDPYCWNAYGNFRTLTIPPVSCLMEGIPRSNLNNEMDYC
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattctcgcgtctcgttactagtatttggtatttctttcatttgcctcttcctt
tgcatccaagctaggcggcattaccatgcacaacaccacaaacatagtcatcttcacaaa
tcatcaaccattccagaacctcccactcctccacctgaacctgcctctcctccacctgaa
cctgcctctcctccacctgaacctgcctctcctccacccgtgcctgcctctcctccacct
gaacctgcctctcctccacctgaacctgcctctcctccacccgtgcctgcctctccttca
cctgaacctgcctctcctccacccgtgcctgcctctcctccacccgtgcctgcctctcct
ccaccattgcctgctaatccatctggcgggagtggcaactctactggagtttttgatgta
cgaagttttggggctattggtgatggcataacagatgatacggacgcgttcaagatggca
tgggacgcagcctgcaaccaagatgattctgctgtcatccttgttccttatggtttcgaa
ttcatgatccaatctacaattttcactggtccttgtcaaggtggcctagtgtttcaggtt
gatgggactcttatgccacctgacggacctgagtcttggccacagaagaacagcaggcgt
caatggcttgtattttacagaatcaacgaaatgtcacttctaggaggtggtgtaatagat
ggcagaggagagaaatggtgggatcttccttgtaaaccccacaagggaataaatgggaca
acaatgcctggaccatgtgatagtccaattgccataaggttcttcatgagctcaaactta
accgtgcaaggacttaaaatcaagaatagcccgcagttcaacttcagatttgacaactgc
aagaatgttcatgtagaatcaattcacattactgctcctgctttaagtcccaacacagat
ggaattcacatagagaacaccaatggtgtggaaatatataattcagtgatctctaatggc
gatgattgtgtatcaatcgggtcaggttgttatgatgtggacataaggaacattacatgt
ggaccgagtcatggaatcagcatcgggagtctaggaaatcacaattcccgagcctgtgtt
tccaatatcacagtcagggattcggtgattagagtctcggataatggagttaggatcaag
acatggcaaggtggatcaggagcagtatcaggaataacattcagtaatattcacatggac
aatgtcaggaatccgataataattgaccaattctactgcctcagcaaggggtgcaccaac
caaacatctgctctttcagtatcagacattctctacgaaaacataaaaggaacttacaac
attcgaagcccaccaatgcatttcgcctgtagtgactcagtaccatgtaccaacttaaca
ctctcagatgttgagcttcttcctgctgaaggagatttagtactggatccatattgttgg
aatgcatatgggaatttccgaactctaactattcctccagtttcttgcttgatggagggc
attcccagatccaacctgaataatgaaatggattattgttga
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