Populus trichocarpa (black cottonwood): 7456026
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Entry
7456026 CDS
T01077
Name
(RefSeq) flowering time control protein FPA isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
SPOC
RRM_1
RRM_occluded
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
7456026
NCBI-ProteinID:
XP_024440497
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Position
14:12764513..12770886
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AA seq
936 aa
AA seq
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MTSRGGGVPGGVGRDRFRREFTSSRFESSNSNGKRGNNPPSRHLWVGNLSHSIEETDLTD
EFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQGYPLAGNPLRIEFAKADKSSTP
SHDEDYLQRRDEQRLTLRGSPFLQRDSRVRNASPETFYPDKSKMSDNSAEPSEVLWIGFP
ALLKVDEMILRKAFSPFGEIEKITVFPGRSYAFVRFTNLTSACRAKETLQGKLFGNPRVH
ICFAKNEAGSSNSGRTPLSPHYKPNSRQGGPENFWQDRNFGSTATDPSIRSPRFNSDLDP
ADSDVYGLNRKGTLHQVGNGAFDNWRFGEELGPPPDVYERHGSPTRGRDAHFHEFAKKNP
QKGPFYEEPWDLPEDSYLYHEAKKLKTGSFPPDKELPEYPYSDLEQERRAFPRAFSDFPQ
PEAFDKNLEAGPFGYTPIQDRPINLSLPHGERSDPWKVSYDNFQAGSGSLPTNRTERKRF
TPEPEPSSLKLWKWEGTIAKGGTPVCHARCFPVGKALDFMLPDFLDCTARTGLDMLAKHY
YQAASAWVVFFVPASDADMGYYNELMHYLEEKQRAAVAKLDDKTTLFLVPPSDFSEKVLR
VPGKLSISGVILRLENSGSNLGPVHHPNEKRDMNILPFHRDPSYPKPPTHSGQFPAMVSF
SDLSRSGGDPAFLGNVASTAPPVAFSGPAHPAGSISDSYNESRHHYPLQQQNSTLRPNWS
PHHSQSIVSGNRNVPSQASNTAVDPVIPEHHSVLPRTVQENGPAHFASGMSTNPVSGNSK
STFQETKPSVPVSLPIAGLQPQQLAQLASSLLGQQRLLGNNSNGSASEDFKRTVNQSGNQ
VGIAQALGLHKNQVGSEMLTSQFSQLQQMQQQQVSNVPTSVPPPVRKELQPGAQGNPRME
SAGTQEEADGDPQKRLQATLQLAAALLQQIQQGKGT
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgactagtagaggaggaggagttcccggaggagtaggcagagaccgatttcgaagagaa
tttacctcttctcgattcgaatcgagtaatagtaacggtaagagagggaataacccgccg
tcgaggcatctatgggtggggaatttatctcacagtatagaagagaccgatttgacagat
gaattcctgcaattcggagacctggatagcgttgcatttcagccgggacgcagctatgct
tttgttaattttaacaaggaagaagatgcgattgcggccatcaagtctctccagggttat
cctctcgccggcaaccctcttaggattgagtttgctaaggcggacaagtcatcaacacca
tcacatgatgaagattacttgcaacggcgagatgaacaacgccttacattaaggggatcc
cctttcttgcagagggactctagagtgcgtaatgctagccccgaaactttttaccctgat
aaatccaagatgagcgataatagtgcagaacctagtgaggtattatggataggttttcca
gctttactaaaggtggatgaaatgatcttacggaaggctttttcaccatttggtgagatt
gaaaagatcactgtatttccaggtcgtagttatgcttttgtgaggttcacaaatctaaca
tcagcttgcagggcaaaagaaactcttcaggggaaattatttggcaaccctcgtgtgcat
atttgttttgccaagaatgaagctgggtcttcaaatagtggaaggaccccgctttctccg
cattacaagccaaacagtcgccaaggaggccctgagaacttctggcaggataggaatttt
gggagcacagctacagatcccagtattagatctcctcgtttcaactcagatttggatcct
gcggattctgatgtctatggccttaacaggaagggaaccttgcaccaggttggaaacggt
gcatttgataactggaggtttggagaagaactaggaccaccaccagatgtgtatgaacga
catggtagtcctacaagagggagggatgcccacttccatgaatttgctaaaaaaaatcct
cagaaaggtcccttttatgaagaaccatgggatttaccagaagattcctatctgtatcat
gaagccaagaagttgaagacaggctcctttcctcctgacaaggaacttccagagtatcct
tactctgatttagaacaggaaagaagggctttccctagggcattttctgattttccccaa
ccagaggcatttgataagaacctggaagctggaccttttggatacacaccaatccaagac
cggccaatcaatttatcacttcctcatggagaaaggagtgacccctggaaggtatcttat
gacaatttccaggctggctctggttctctgcccacaaatcgcactgagaggaaaagattc
acccctgaaccagaaccatcctctttgaagttatggaaatgggaagggactatagcaaag
ggagggactcctgtctgtcatgctcgctgctttcccgtgggaaaagcgctagactttatg
ttgcctgatttcctggattgcactgcaagaactggtctagacatgcttgcaaaacactac
tatcaagcagcttctgcttgggttgtattctttgtccctgctagtgatgcagatatggga
tactacaatgaactcatgcactatctggaggagaagcagcgtgcagcagttgctaaattg
gatgataagaccaccttgtttcttgtacctccatctgatttctcagagaaagtactgaga
gtacctggcaaattgagcatatctggtgttattttgaggttagagaattctggttcaaat
cttgggcctgttcaccatccaaatgaaaaaagggatatgaatatactgccatttcacagg
gatccatcgtatccaaagccaccaacacattcaggtcagtttcctgcaatggtgtctttt
tcagatttgagtagatcaggaggtgatccagctttcctagggaatgtggcttcaacagct
ccacctgtggcattttcgggtccggcccatcctgctggaagtatatctgattcctacaat
gagagtaggcatcattatcctctccaacagcagaactccacattgaggcccaactggtct
cctcaccattcccagagcattgtttctggtaatagaaatgtaccatcacaagcatccaat
actgctgttgatcctgttattccagagcatcactcagtcctgccaaggacagtgcaagaa
aatggccctgcacattttgcaagtggaatgtcaaccaatccagtgtctggaaacagcaag
tcgacctttcaggaaaccaagccttctgttccagtgtctttgcctattgcaggtttgcaa
ccacaacaacttgcacaattagcatcatcgcttctagggcagcagaggctattgggtaat
aattcaaatggatctgctagtgaggattttaagcggacagtgaatcagtctggcaaccaa
gttggaatagcacaggcacttggtttgcacaaaaatcaagtgggctctgagatgctgaca
tctcagtttagtcaattacaacagatgcaacagcagcaggtatcaaatgtgcctacttca
gtgccacccccagttagaaaagagcttcagccaggggctcagggtaatccacggatggaa
agtgctggcacacaagaggaagcagatggagatcctcaaaagcgtctgcaagcaacatta
cagctcgcagcagctcttcttcagcaaatacaacaagggaaaggaacttga
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