Populus trichocarpa (black cottonwood): 7457883
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Entry
7457883 CDS
T01077
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7457883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7457883
03016 Transfer RNA biogenesis [BR:
pop03016
]
7457883
03012 Translation factors [BR:
pop03012
]
7457883
04131 Membrane trafficking [BR:
pop04131
]
7457883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7457883
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
7457883
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
7457883
Translation factors [BR:
pop03012
]
Eukaryotic type
Elongation factors
7457883
Membrane trafficking [BR:
pop04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
7457883
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7457883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
Motif
Other DBs
NCBI-GeneID:
7457883
NCBI-ProteinID:
XP_002312029
UniProt:
B9HLP2
LinkDB
All DBs
Position
8:complement(2432266..2435022)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGTVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVEKKDASSAKVTKSAVKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagagtcacattaacattgtggtcattggccatgtcgactctggcaag
tcaaccaccactggacacttgatctacaagcttggaggtattgacaagcgtgtcatcgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctt
gacaagctcaaggctgagcgcgaacgtggtattaccattgatattgctctgtggaagttc
gagaccaccaggtactactgcactgtcatcgatgctcctggacatcgtgactttataaag
aacatgattaccggaacctcccaggctgactgtgcagtcctcatcattgactctaccact
ggtggttttgaggctggtatctccaaggatggtcagacccgtgagcatgctcttcttgcc
ttcacccttggtgtcaagcaaatgatctgctgctgtaacaagatggatgccaccacacca
aaatactccaaggctaggtatgatgaaattatcaaggaagtgtcatcctatttgaagaaa
gtcggttacaaccctgacaagattcccttcgtgcctatctctggttttgagggtgataac
atgattgagaggtccaccaacctggactggtacaagggaccaactctcctcgatgccctc
gaccagatccaggagcccaagaggccctcggacaagcccctccgtctcccacttcaggac
gtgtacaagattggtggtatcggaacggtcccagtgggtcgtgtggaaactggtgtcatc
aagcctggtacagttgtcactttcgggccaactggactaactactgaagttaagtctgtt
gagatgcaccacgaagcactccaagaggctcttcccggtgacaatgttggattcaacgtt
aagaatgttgccgtgaaggatctgaagcgtggttttgttgcctcaaactcgaaggatgat
cccgccaaggaggctgcgaacttcacctcccaggtgatcatcatgaaccatcctgggcag
attggaaatggttacgcccctgttcttgactgccacacctgtcacattgctgtcaaattt
gctgagatcctcaccaagattgacaggcgatcagggaaggagttggagaaggaacccaaa
ttcctgaagaacggtgatgcaggtatgattaagatgattcccacgaagcccatggtggtg
gagactttctcagagtatcccccacttggtcgttttgctgtgagggatatgcgccagact
gttgctgtgggagtgatcaagaacgtggagaaaaaagatgcttccagtgctaaggtgaca
aaatctgctgtcaagaagggtggcaagtga
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integrated database retrieval system
