Populus trichocarpa (black cottonwood): 7458915
Help
Entry
7458915 CDS
T01077
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7458915
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
7458915
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
7458915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7458915
NCBI-ProteinID:
XP_002323238
UniProt:
B9IHP4
LinkDB
All DBs
Position
16:complement(2003480..2005620)
Genome browser
AA seq
584 aa
AA seq
DB search
MDQLPKCDANYVPLTPINFLKRAAKVYGNRLSVVHERTHFTWQQTYERCLRLADSLRSFN
IAKNDVVSVLAPNIPALYEMHFAVPMAGGVINAINTRLNPNHVATILRHSEAKVFFVDYQ
FVQLARQALQIMMTSESISSKLVLPSVVLIDDIESPTGAIFGEWEYEQLVRKGNPGYIPY
EVQDEWDPIALNYTSGTTSEPKGVVYSHRGVFLGSLGIIIGWEMESEPVYLWSLPMFHCN
GWTLAWGIAARGGTNVCLRNTTAKDMYRNIAQHKVTHMCCAPIVFNIILEAKPDERREIS
SPVQILVGGAPPPASLLEKMKPLGFHVTHSYGLTEVGPALVCEWQAKWNNLPSQDQSRIM
ARQGINTVALAHMDVKDLSTMISVPWDGKTMGEIVLRGSTVMKGYFKDPKATAKAFKNGW
FATGDIGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYSHPRVLEAAVVAMPHPVW
GESPCAFLAIKKNSEGKSDDVKEADIIAYCRKKLPHYMVPKKVEFMSELPKTSTGKVQKF
QLRDLTRNFVVSENFPSKKTAQINAKTETQGHKAQPVRVPSSRL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacttccaaaatgtgatgcaaattacgttcccctcacacccataaatttcttg
aagagagctgccaaagtttatggcaatcgcctatctgttgtacacgaaagaacccacttc
acatggcagcaaacatatgagcgttgcctccgccttgctgattctctccgttcctttaat
attgccaaaaacgatgttgtttcggttttggctccgaacattccagctctgtatgagatg
cactttgcagtgcccatggcaggaggggtgatcaatgccatcaacacgaggctaaatcca
aatcacgttgccaccattctgcgccattcagaagcgaaggtcttctttgttgactaccaa
tttgtgcagttggcaaggcaggccctccaaataatgatgacaagtgaatctatttcatcc
aaattagttctcccttcagtcgttctcattgatgacattgagtcaccgacaggtgccatt
ttcggcgaatgggagtatgaacaacttgtccgaaagggcaatccagggtacattccttat
gaggtccaagatgaatgggatcccatagccttgaattacacgtctggaacaacatcagag
ccaaaaggagttgtctatagccacagaggtgtcttccttggctcccttggcataatcatt
ggctgggaaatggaaagtgagcctgtgtatttgtggtctcttcctatgttccactgtaat
ggctggaccttagcttggggcattgcagcacgcggtggaaccaacgtttgcctacgcaat
accacagctaaagacatgtataggaacattgctcagcacaaggtgactcacatgtgctgt
gcacccattgttttcaacataattcttgaggccaaacctgacgagcgtcgagaaatatct
tctcctgtccaaatacttgtcggtggtgcaccaccaccggcctcacttcttgaaaagatg
aaaccattaggattccatgtcactcattcctatggcctgacagaggttggaccagccctt
gtgtgcgagtggcaagctaagtggaacaatcttcctagccaagatcagtcaagaatcatg
gctagacaagggattaacacagtagctcttgctcatatggatgttaaagatttgagtaca
atgatcagcgtgccttgggatggtaaaacaatgggggaaattgttctgagaggaagcacc
gttatgaaaggatatttcaaggacccaaaggccaccgcgaaagcattcaagaatggatgg
tttgctacaggcgatattggggtcatacatcctgacggatacttggaaatcaaggacaga
tcaaaagatgtcattatatctggtggtgaaaatatcagcagtgtagaattagagtctgtc
ctttacagccatccaagagtcctagaggcagctgtggtggccatgccacacccagtttgg
ggagaaagtccttgcgcttttcttgccattaagaagaactcagaagggaaatctgatgat
gtcaaagaagctgatattattgcttattgcaggaaaaagcttccccattatatggttcca
aagaaggtggagttcatgtctgagttacccaagacttcaacaggaaaagttcagaaattc
cagttaagggatttaacacgaaactttgttgtctcggagaactttcctagcaagaagact
gcccaaatcaatgccaaaacggaaacacaaggacataaggctcagccagttcgtgttcct
tcctctcgtctttga
DBGET
integrated database retrieval system
