Populus trichocarpa (black cottonwood): 7458946
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Entry
7458946 CDS
T01077
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7458946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7458946
03032 DNA replication proteins [BR:
pop03032
]
7458946
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
7458946
Prokaryotic type
7458946
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
7458946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
7458946
NCBI-ProteinID:
XP_024443529
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Position
16:complement(2594340..2597206)
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AA seq
602 aa
AA seq
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MSEVELSRSEKKKHKKKTQETETETNPTDTVKDFMIKPQNFTPTIDTSQWPILLKNYDRL
NVRTGHYTPLPCGHSPLKRPLAEYIRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSG
TLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHDKIADVTKVARALETLTGAVFQ
RPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGGH
MQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVILTSYKRLVVK
DSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV
VAKIKRVVMDRDTYPRKWGLGPKASIKKKLISEGKLDKHGKPNDNTPHEWARNLVLPAGG
DSMVAGLAAAAEPVVKEIGEDGEGRKRKLDESSDSPAAHVAKKAKTELVKDEESVKVKKV
KEELVEGSDDEKKDKKKKKKKSKEDGEAGKEEKVELKKLKEEPVVGSEDEKKEKKKKKKK
SKEDAEVENLVEKETEKSEKKKKKKKDKEAEEAATIENGKADGEADKSEKKKKKKKDKDG
ED
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtcgagctttctcgttctgagaagaaaaaacacaagaaaaaaacccaagaa
actgaaacagagacgaaccctacagacacagtcaaagatttcatgatcaaacctcagaac
ttcaccccaacaatagacacttcacagtggccaattcttttgaaaaactacgacagactt
aatgtgcgaactggacactacactccacttccatgtggtcactcacctctcaagcgtcca
cttgctgaatacatcaggtatggtgttatgaatcttgataaaccagcaaacccatcatca
catgaagttgttgcttggattaagaggattttacgtgtcgaaaaaactggtcatagtggt
actttagaccctaaagttactggtaatttaattgtttgcattgatagagctactagactt
gttaaatctcaacaaggtgctgggaaagagtatgtttgtattgctagattgcatgataag
attgctgatgttacgaaagtagccagagcattagagacgcttactggagcggtttttcag
aggccgcccttgatttcggctgttaaaagacagcttagaattaggacaatttatgagagt
aagttgttagagtatgatgcagataagcatttggttgttttttggatttcgtgtgaggcg
gggacatatgttaggacaatgtgtgtgcatttggggttgattcttggggtaggtgggcat
atgcaagaattgaggagggtgaggtcagggattttaggggagaaagataatatggttact
atgcatgatgtcatggatgctcaatgggtttatgataattatcgtgatgagagttatttg
aggagggttattatgccccttgaagtgattttgactagttataagaggctggttgtgaag
gattctgctgtgaatgcaatttgttatggtgctaagttgatgattccagggctgttgagg
tttgagaatgatattgaggctggtgaggaagttgtgttgatgactactaagggtgaggct
attgctctgggaattgctgagatgacaactgctgttatggctacttgcgatcatggtgtt
gtggcaaagattaagagggttgtgatggatagggatacttatccgaggaaatggggattg
gggccgaaggcatcaatcaagaagaagttgatttctgaggggaagttggataaacatggg
aaaccaaatgataatactcctcatgaatgggcgagaaatttggttttgcctgctggtggt
gattccatggttgctggccttgctgctgctgctgaaccagttgtgaaggagattggtgaa
gatggtgaggggcgcaagcgcaaattggatgaaagctctgatagccctgctgctcatgtt
gcaaagaaggctaaaactgaattagttaaagatgaagagagtgtcaaggttaagaaggtg
aaggaagagcttgtggagggaagtgatgatgagaaaaaagacaaaaagaagaagaaaaag
aagagtaaagaggacggtgaggctggaaaggaagagaaggttgagttgaagaagctaaag
gaagagcctgttgtgggaagtgaagatgagaagaaagagaaaaagaagaagaaaaagaag
agtaaagaggatgctgaagtggaaaatttagtagaaaaggagactgagaagtctgagaag
aagaaaaagaagaagaaagacaaagaggctgaagaggccgcaaccattgagaatggcaaa
gctgatggagaggctgataaaagtgagaagaagaaaaagaagaagaaggacaaagatgga
gaagattag
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