Populus trichocarpa (black cottonwood): 7461340
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Entry
7461340 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1 isoform X2
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zinc_ribbon_9
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
HypA
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
7461340
NCBI-ProteinID:
XP_002303979
UniProt:
B9GXX2
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Position
3:complement(21622584..21625256)
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AA seq
388 aa
AA seq
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MFVGEGGEGGQTMAARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDMIDSTGDNQVPDSE
FGSDRALSLWAPVLLGMVGNSHRRRRLRRVEYEEDEDGNDDGEANHAGEPEFEREIESFM
RRRRRSRRNSATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQS
IIVQGSYDSNNVQNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEAL
PTVTVKEPLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADES
KLDSERSRNTFDQRDSESTNSESNISNGINVEEGDGEGRSGNGRRFSFPWPFNSLFSSSS
GSQSGGSHPSSTASSSNAPGSASQTDEN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttggtgaaggaggggaggggggacaaacaatggctgcacgctactggtgccat
atgtgctctcaaatggtaaatcccatcatgggagttgagatcaaatgccctttttgccaa
aatggtttcattgaagatatgattgatagcactggggataatcaggtccctgactctgaa
tttggatctgatcgtgccctctccctttgggccccagtcttgcttggcatggtgggaaat
tcccatcgtcgtagaaggcttagaagggtggagtatgaagaagatgaggacggcaatgat
gatggtgaagcaaaccatgcaggagaacctgaatttgagcgtgaaatagaatcattcatg
aggaggaggaggaggagcagaagaaactcggctacaatattgcaattgcttcaaggaatt
cgtgctggaattttggtatctgaatccgagaacttggaaggagatagggatagggatagg
gttagggatatgaacagggaaagagagcgtgtcattttgatcaatccatttaatcaaagt
atcattgttcagggttcttatgattcaaacaatgttcaaaaccagaatcaaaatgcaatt
gggtcattaggtgattatgtcattggacctggcttggatttgttattgcagcacttggca
gagaatgatcctaatagatatggaactccaccagctcaaaaggaagccattgaggcattg
cctactgtaactgttaaggagcctttgcagtgttcggtgtgcttggatgattttgagatt
ggtgccgaggcaagggaaatgccatgtaagcacaagtttcatagtgggtgtatattgcca
tggctggagcttcatagttcctgtccagtttgcaggcatcagttgcctgctgacgagtcc
aagcttgattctgagagatctagaaatacctttgatcagagggacagtgaaagcactaac
agtgaaagtaatattagtaatggaattaatgttgaagagggagatggggaaggaagaagt
ggaaatgggagaaggttttcctttccatggcctttcaatagcttgttttcatcttcatct
ggttctcaatctggtggaagccatccatcctcaacagcatcctcctcaaatgcaccagga
agtgcttctcaaacagatgagaattga
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