Populus trichocarpa (black cottonwood): 7461669
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Entry
7461669 CDS
T01077
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 homolog A
KO
K03032
26S proteasome regulatory subunit N2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7461669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7461669
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7461669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
7461669
NCBI-ProteinID:
XP_002300175
UniProt:
B9GFX8
LinkDB
All DBs
Position
1:32514052..32520616
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AA seq
1004 aa
AA seq
DB search
MATTMVSSAGGLLAMLNESHPLLKQHALYNLNNLVDQFWPEISTSVPIIESLYEDDEFDL
HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASLKSK
AAESNADGADVDPRLEAIVERLLDKCIMDGKYQQAMGIAIECRRLDKLEEAIMKSDNVQG
TLSYCINVSHSYVNRREYRQEVLQLLVKVYQKLPSPDYLSICQCLMFLDEPEGVASILEK
LLRSGNKDEALLAFQIAFDLVENEHQAFLLNVRDRLSPPKSQVSEPALPKSTAPDSSQNE
NSSAPEDVQMTEGTSSSTVHEIDPSEAVYAERLTKIKGILSGETSIQLTLQFLYSHNKSD
LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAG
LGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRESL
RSTSVEVIQHGACLGLGLAALGTADEDIFDDIKSALYTDSAVAGEAAGISMGLLMVGTAS
EKTSEMLAYAHDTQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYAL
ALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNP
HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQMNEASDSRV
GTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLAVF
SQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFVSNAKPSLFEYPKPTTVPTATSAV
KLPAAVLSTSVKAKARAKKEADQKATAEKAAGVESSPASTSAGKGKAPSEKDGDAMQVDG
QPEKKAEPEPSHEILTNPARVVPAQEKFIKFMEDSRYVPVKSAPSGFVLLRDLQPTEPEV
LSLTDTPSSAASPASGSTTGQQSSASAMAVDEEPQPPQPFEYTS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaactatggttagctccgctggtggactgttagctatgcttaatgagagccat
cctttgttaaaacaacacgcactttacaatctcaacaacttagttgatcaattttggcct
gagatctcaactagtgtgcctataatagagagtttgtatgaagatgatgagtttgatctg
catcagagacaacttgctgcattgcttgtttctaaggttttctattatttgggtgaactt
aatgactcactgtcttatgcccttggagctggatccctctttgatgtttcagaggattct
gactatgttcatacacttcttgctaaagctatagatgagtatgctagcctaaagtctaag
gcagctgaatcaaatgctgatggagcagatgtggacccaaggttagaggcaattgtggag
agactgctggacaagtgcatcatggatggaaagtaccaacaagctatgggaattgcaatt
gaatgccgtagattggataaactcgaggaagctatcatgaagagtgataatgtgcaggga
actctttcctattgcattaatgtttctcattcatatgttaaccgtagagagtatcggcaa
gaggtcctccagcttcttgttaaagtatatcaaaagctgccttctcctgattatttgagc
atttgtcagtgtttgatgttcttggatgagcctgaaggtgtagctagcatattagaaaaa
cttctacgctcaggaaataaggatgaagctttgttggcatttcaaatagcttttgatctt
gtggagaacgagcaccaggcttttcttctaaatgttagagaccgtctttcacctccaaag
tctcaagtttcagagccagcactgccaaaatccacagctccagattcatctcaaaatgaa
aattctagtgctccagaagatgttcaaatgacagaaggaacttcatcttctacagtgcat
gaaatagatccaagtgaagcagtgtatgctgagaggctgacaaaaatcaaaggaattttg
tctggggagacatctatacagctgactctgcaattcctatatagtcataataagtcggac
ctccttattctgaagacaattaagcaatcagttgagatgagaaatagtgtctgccacagt
gcaactatttatgctaatgcaattatgcatgctggaacaactgtggatacatttctcagg
gaaaatctagattggttgagtagggccacaaattgggccaaatttagtgcaacagcaggt
cttggtgtcatccatagaggccacttgcagcagggcaggtcactgatggccccttatttg
cctcaaggtggtgctggtggcggaggtagtccatactcagaaggtggtgccctctatgct
ctgggactcattcatgccaaccatggcgagggcataaaacaattccttcgtgaaagctta
cgtagcaccagtgtggaggttattcaacatggtgcatgtttaggtcttggtttggcagct
cttggaacagccgacgaagatatctttgatgacattaaaagtgcattgtatactgatagc
gctgttgctggtgaagctgctggtatcagtatgggtttgcttatggttgggactgcaagt
gagaaaactagtgagatgcttgcatatgcgcatgatacccaacacgagaaaatcatcagg
ggattagcattggggatagcccttacagtttatggaagagaagaagaagcagacacgcta
atcgagcagatgactcgtgatcaagatcctatacttcgttatggtggcatgtatgccttg
gcattggcctacagtggaacagcaaacaacaaggctattcgccagttgctgcactttgct
gtatcagatgtgagtgatgatgtcaggaggactgctgttcttgcacttggatttgtcttg
tactccgagccagagcagactcctcgaattgtgtccttgctttcagagtcttataatcca
catgtacgatatggtgctgctcttgcagttggcatctcctgtgcaggcactggcttgagt
gaggctatatcattgctagaacctttgacgtcagatgttgttgattttgttcgtcaaggt
gctctcattgcaatggctatggtcatggtccagatgaatgaagccagtgattctcgtgtt
ggaacattcagacggcaattggaaaagataattctagataagcatgaagacacaatgagc
aagatgggagcaatccttgcttccggaatacttgatgctggtggtaggaatgtgactata
agattgctttctaagacaaagcatgataaaatcactgctgttgttggccttgctgttttt
agccaattttggtactggtatccacttatctatttcataagcttggcattctcacccaca
gcttttattggcctcaactatgacttgaaagttccaaaatttgagtttgtatcaaatgca
aagccatctctgtttgagtatccaaaaccaaccactgtgcctactgcaacatctgctgtg
aaacttcctgccgcagttctgtcaacatcggtgaaggccaaagctagggccaagaaagaa
gcagatcagaaagctactgctgaaaaggcagctggagtggagtcttcacctgcttcaact
agtgctggaaaaggaaaagcgcccagtgagaaggatggggatgctatgcaggttgatgga
caaccagagaagaaagcagagcctgagccttctcatgaaattttgacgaacccagccagg
gttgttcctgcccaggagaaatttattaaatttatggaagacagcagatatgtgccagtg
aagtcagcaccttcagggtttgttctcttgagagacctgcaaccaactgaacctgaggtg
ctttctcttacagatacaccatcatctgcagcatcaccagctagtggttcaaccacagga
cagcaaagttcagcatcagccatggccgttgacgaggaaccccagcctccacagcctttc
gagtacacctcataa
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