Populus trichocarpa (black cottonwood): 7462548
Help
Entry
7462548 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7462548 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_22
AAA_16
RuvB_N
TIP49
AAA_18
IstB_IS21
AAA_28
AAA_5
AAA_14
AAA_33
nSTAND3
RNA_helicase
Mg_chelatase
Vps4_C
AAA_25
PhoH
AAA_17
AAA_24
TsaE
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
7462548
NCBI-ProteinID:
XP_024461315
LinkDB
All DBs
Position
7:9059258..9075302
Genome browser
AA seq
1046 aa
AA seq
DB search
MYTGIFKCRNQRWCSFFHPSKHFIRPNCQDRPLSCTTVVRDHFSHVSFIKRQLLHSISSR
STAFGNSDSGLHIRSNMCWTNIQFRTCSSGANGRNTSEDKHGPVKDGASFDNEKTQRERV
SEDAKHCDAHAQLGEQDQKEWLHNEKLAIESKRKESPFLTRREKFKNEFLRRIVPWEKLH
VSWDNFPYYINEHTKNTLVECVTSHLKHKKCTTSYGARLTSSSGRIMLQSVPGTELYRER
TVKALARDLQVPLLVLDSSVLAPYDFGDDEIESDDSAGEESCSESEVEDDNDAVNEEEWT
SSAEAKSDCSDDDAVDLEANAEAALKKLLPCSLEEFEKRVSGECDSSSESSKNESTGTSE
IPKRPLNKGDRVKYIGPSIRIEADDRVILGKIPTSDGLKNAYTTIRGRPLSSGQLGEVYE
VNGDRVAVILDISNDNKEDDGEKDEKLMEQPAKAPVYWIDAKDIEHDPDTGIEYCYIAME
VLCEVLCSVQPLIVYFPDSSQWLSRAVPKSNRKDFLSKVQEMFDKLSGPVVLICGQNKAE
TGSKEKERFTMLLPNLGRLAKLPLSLKHLTDGLRGAKRSNENDITKLFTNILCLYPPKEE
DLLRTFNKQVEEDRRIVISRSNLIELHKVLEENEMSCMDLLHINTDGLILTKRKAEKVIG
WAKNHYLSSCLLPCIKGDRLSLPRESLEMAIVRLKEQETISEKPSQNLKNLAKDEYESNF
ISAVVAPGEIGVKFNDVGALEEVKKALNELVILPMRRPELFSHGNLLRPCKGILLFGPPG
TGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDS
LLGARGGSFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRI
HVDLPDAENRMKILRIILYRENLEADFQFDKLANATEGYSGSDLKNLCIAAAYRPVEELL
EEEKKILNALFSIELKFHDDRKRRLNKGGKNGATPALRPLNLEDFIQSKAKVGPSVSFDA
ASMNELRKWNEQYGEGGNRKKSPFGF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtatactggaatatttaagtgtaggaatcagagatggtgttctttctttcatccatca
aagcatttcattaggccaaactgccaggatcggcctctgagttgtacaacagtagtgagg
gaccacttttcacatgttagtttcattaaaagacagctattacattcaatttcatcaagg
agtactgcctttggaaatagtgatagtggtttacatataaggtctaatatgtgttggacg
aatattcaattccgcacatgtagttcgggagccaatggaaggaatacaagtgaggataaa
catggcccggtgaaagatggggctagctttgataatgagaagactcagcgagaaagagtt
agtgaagatgcgaagcattgcgatgcacacgctcaattaggggaacaagatcaaaaggag
tggcttcataatgagaagcttgctatagaaagtaaaaggaaggaatctccatttttgacc
agacgagaaaagtttaaaaatgaattcttgaggagaattgttccatgggagaagttacat
gtttcttgggataattttccgtactacatcaatgagcacactaaaaatactctggtggaa
tgtgttacttcccatttgaaacataaaaaatgcaccacttcctatggggcccgtctgaca
tcttcaagtgggagaattatgctccagagtgttccaggaactgagctttatcgggaaaga
acagttaaagcacttgcacgggatttacaagttcccctgttggtgcttgatagcagcgtt
cttgctccttatgattttggcgatgatgagattgaatcagatgatagtgcaggagaggag
agttgctcggagtcagaagttgaggatgacaatgatgcagtcaatgaagaggaatggaca
agcagtgcagaggcaaaatcagattgtagtgatgacgatgcagttgacctggaggcaaat
gctgaggcagccttgaagaagcttcttccctgtagccttgaagaatttgagaagagagtt
tctggagaatgtgacagttcctctgagtcctcaaagaatgagtccacaggcacttctgag
atccccaaaaggccacttaacaaaggggatcgggtgaagtacattgggccgtccatacgc
attgaggctgatgacagggtcatattggggaagataccaacatctgatggtctgaaaaat
gcttatacaactatccgtggcaggcctttatcaagcggtcaacttggggaggtatatgag
gtgaatggagatcgagtcgctgtgattttagatatcagtaatgacaacaaagaagatgat
ggagagaaggatgagaagctcatggagcagcctgcaaaagcaccagtttattggatagat
gctaaggatattgagcatgatcccgacactgggatagaatattgctatattgcgatggag
gttttatgtgaggttttgtgttctgtgcaaccccttattgtctattttccagattcttct
cagtggttgtctagggcggttcccaagtcaaaccgcaaggattttttaagcaaggtgcaa
gaaatgtttgacaaattatcaggtcctgttgttttgatatgtggacaaaacaaagctgaa
actgggtcaaaggagaaagaaagatttacaatgctactcccgaatcttggacggctggca
aagctgcctctctccttgaagcacctcactgatggactcagaggtgcaaagaggtccaat
gaaaatgacataactaagctcttcaccaatattttgtgcctctatcccccaaaggaggaa
gatcttcttagaacattcaataaacaggttgaagaggacagaagaattgtgatatcaagg
agcaatttaattgaactgcacaaggttcttgaagaaaatgagatgtcatgcatggaccta
ttgcatataaatactgatggcctcattctaacaaagcggaaggctgaaaaagtcattggc
tgggctaagaatcattacttatcatcatgcctgctcccatgcataaaaggggatcgattg
tctttgccccgagaaagccttgagatggcaattgtgaggttgaaggagcaagaaaccata
tctgaaaaaccatcacagaatttgaagaacttggccaaggatgagtatgagagcaacttt
atctcagctgtggtagctccaggtgaaattggtgtcaaattcaatgacgtaggtgctctt
gaagaagtgaagaaggctttgaatgaacttgtcattcttccaatgaggagaccagaactt
ttctctcatggaaatttgctgcggccttgcaaagggattttgctttttggacctcctgga
actgggaaaacccttcttgccaaagcgcttgcaacagaggcaggggcaaactttatcagc
ataactggttcaactcttacttcaaagtggtttggagatgctgaaaagctcacaaaggct
ctcttctcctttgccagcaagctggctcctgtcattatatttgttgatgaggttgacagt
ttgcttggtgctcgtggtggctcttttgagcatgaagctacaagaagaatgagaaatgaa
ttcatggcagcatgggatggattgcgatcaaaagatagccagagaatccttatccttggt
gccactaatcgaccatttgatcttgatgatgctgtaatccgccggttacctaggagaata
cacgtggacctaccagacgccgaaaatcgtatgaagattctcagaataattctgtatcga
gaaaatttagaagctgacttccagtttgacaaacttgcaaatgcaaccgagggatattcc
ggaagtgatttgaagaacctatgtatcgctgcagcatatagaccagtcgaagaactttta
gaagaagaaaagaagattctgaatgccctgttttctattgagttaaaatttcatgatgat
cggaaaaggcgtttaaataagggtggcaagaatggtgcaactccggcattaagaccactt
aatttggaagatttcattcagtcaaaagcaaaggtggggccgtcagtttcctttgacgca
gcaagtatgaatgagctgaggaagtggaatgaacaatatggagaaggtggaaacagaaaa
aaatcacctttcggtttctga
DBGET
integrated database retrieval system
