Populus trichocarpa (black cottonwood): 7463145
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Entry
7463145 CDS
T01077
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7463145
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
7463145
FA (Fanconi anemia) pathway
7463145
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
7463145
NCBI-ProteinID:
XP_002322278
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Position
15:complement(11993219..11999160)
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AA seq
598 aa
AA seq
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MTRRRLRLSSYSDDDDDEEEQQNHQQDYQMESHQLPNPNPNLPEQPVPLPISSDDAEFAD
ASDNLTPPSPPYPPSVAPPISGCPIGDFLLRTGLSLKREWLDSCLRQIDNSLDIVSKAKI
CFGQFLISDMNHCGAGVLPPNVDSMHLADLPGPFVLQVDEIVNISCPLKGRYQDANAGVK
RCLKLSMTDGVQRVFGMEYRSIKDLKVLAPPGFKVAICNVHIRRGLLMLVPEALAILGGV
VEELDAARQRLADEINKPPRGRRSRTGEVPPLATRATQAAWAPNGVNIPSSTNNSGNVPG
HTNTSADDLQNTNGSGNALGRTNSSVKVVQHTDRSTLRVATPFQEDGRGANLVVSGTDTS
QRTVEECAVPMSAETTMCNLSSSIVSDVGEMHINSPISGVNSVSNQHSNGTLEQEDVCMI
DEFEHPLILSRDREIPFTYLASLSAKWAAMKEKEPSVRGKIKCFLTGVKGFQYKQRTTYE
LQVYVDDGSLISEILIDHNVVLKGIGCSPVEVTTALSSSDKKRAGEMKETLRQFQMFLVN
FEGTMLIEINGASKLPVALEMNQGCPPSDAWLLMRRLKSFSSSLTPQHSSMGPIDISP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacgacgcctcagactcagctcttactccgacgacgacgacgacgaagaagaa
cagcaaaaccaccaacaagattatcaaatggaatctcaccaattaccaaaccctaaccct
aacctccctgaacaaccagtgccacttccaatctcctccgacgatgctgaattcgccgac
gcctccgataacctcactccaccgtctcctccgtatcctccgtcggtggctccacccata
tccggttgtcctattggggattttctactgagaacgggacttagtttaaaaagagagtgg
cttgattcctgtcttcgccaaattgacaactcgcttgacatagtgtcaaaggctaagatt
tgcttcggtcagtttttgatttcagatatgaatcactgcggtgctggtgtgcttcctcca
aatgtggactctatgcaccttgctgatctccccggaccgtttgtgttgcaggtggatgag
attgttaacattagttgtccacttaaaggaaggtatcaggatgcgaatgcgggagtgaag
aggtgccttaagctgtctatgacggatggtgtccaacgtgtttttggcatggaatatagg
tctattaaggatcttaaagttttagctcctccaggattcaaggttgctatctgtaatgta
catatacggcgtgggcttttaatgttggttcctgaagctttagcaattttaggaggagtg
gttgaagagttggatgcagcacgtcaacgtcttgctgatgagataaataaaccaccaagg
ggaagaagatcaaggactggagaggttcctcctttagcaactagagcaactcaggctgca
tgggcccctaatggagtcaatattcccagtagcaccaataactcaggtaatgttcctggg
catacaaatacctcagcggatgatcttcagaacaccaatggttctggtaatgccctggga
cgcaccaatagttctgtcaaagttgttcaacatactgatagatccacattacgagttgca
actccctttcaggaagatggacgaggtgccaatttggttgtatctggcactgatactagt
caaaggactgtggaagaatgtgctgttccaatgagtgcagaaaccactatgtgtaatcta
tcatctagtattgtttccgatgttggggagatgcatatcaattctcctataagtggggtg
aattctgtgtctaaccaacactctaatggtactttggagcaagaggatgtctgcatgatt
gatgaatttgaacaccccctcatattatctagagaccgagaaatcccattcacatacttg
gctagtttgtcagctaaatgggcagcaatgaaggagaaagaaccttctgttagaggaaag
atcaagtgcttcttgactggtgtaaagggattccaatataagcagaggacgacatatgag
cttcaggtttatgttgatgatggcagcctcatttctgagatcctaattgatcacaatgta
gtgctgaaaggaataggttgttctcctgtggaggttaccactgctctttcttcgtcagat
aaaaagagagctggtgaaatgaaggagaccctgagacagtttcagatgttcttagtgaat
tttgagggaacaatgctcatagagataaatggagcctctaaacttcctgttgctcttgag
atgaaccaaggctgtcctccttctgatgcatggttgcttatgagaagactgaagtccttt
tcttcttccctaacaccacagcattcctccatgggacctattgatatatcaccgtaa
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