Populus trichocarpa (black cottonwood): 7463156
Help
Entry
7463156 CDS
T01077
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00071
Fatty acid degradation
pop01100
Metabolic pathways
pop01212
Fatty acid metabolism
pop04146
Peroxisome
Module
pop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
7463156
00071 Fatty acid degradation
7463156
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7463156
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7463156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7463156
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
7463156
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
7463156
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of breast milk
7463156
Exosomal proteins of breast cancer cells
7463156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
7463156
NCBI-ProteinID:
XP_002302236
UniProt:
B9GU43
LinkDB
All DBs
Position
2:complement(5972877..5979459)
Genome browser
AA seq
696 aa
AA seq
DB search
MSPYIVGVLVPLLVTLLYQNSKNTKKRGVPVDVGGEPGYAIRNSRFPILLETAWEGVFTL
AQLFELACKKHADKYLLGTRTLISKDTQVSADGRSFEKLHLGEYEWLTYGEVFEKVCNFA
SGLAHLGHRSEERVAIFADTRAEWFMALQGSFRRNISVVTIYASLGEEALCYSLNETEVT
TVICGNKELKKLVEVSGQLDTVKRVICMDDDIPSSASLVAQSGRWRVVSMADVEKLGREN
PVDDVLPLAADVAVIMYTSGSTGLPKGVMMTHGNVLAVVSSVRTIVPGLEGNDVYLAYLP
LAHILEIAAENLVAGVGSAIGYGSPLTLTDTSNKIKRGTKGDATVLRPTVMAAVPAILDR
VREGVRKKVDEKGGIAKKLFDFAYARRISAINGSWFGARGLEMLLWNFLVFRKVRAILGG
RIRFLLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEFDDTSVGRVGNPVPC
SYIKLVDWPEGGYLISDSPMPRGEIVIGGPNVTLGYFKNEAKSKEVYKVDERGMRWFYTG
DIGQFHADGCLEIIDRRKDIVKLQHGEYVSLGKVEAALIVSPYVDNMMLHADPFHSYCVA
LIVVAQPVLEEWASKRGIAFTSFAELCEKEEAIKEVQASLVKAAKAARLEKLEIPAKIKL
LSDPWTPETGLVTAALKLKREAIRKAFSEELSKLYE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatacatagtaggtgtcctagttcctcttctagtcactcttctctatcagaat
tccaagaatacaaagaaacgtggggtgcctgttgatgttggtggggagccaggatatgcc
attcgcaactctcgatttccaatcctcttggaaactgcatgggaaggtgtctttactctt
gctcaactttttgagctggcgtgcaagaaacatgcagataaatacttgcttgggacgagg
acattaatctcaaaggacactcaagtatctgccgatggaaggtcttttgagaagcttcat
ttgggagagtatgagtggctgacctatggggaagtgtttgaaaaggtgtgcaattttgct
tctgggttagctcaccttgggcatagaagcgaggaacgtgttgcgatatttgctgataca
agagcagagtggtttatggccttacagggttcttttaggcgcaacatttctgtggttacc
atctacgcatctttgggagaggaggcactttgctattcattaaatgagacagaagttaca
actgtgatttgtgggaacaaagaactgaaaaaacttgtagaagtaagtggtcagcttgac
acagtgaaacgcgtgatatgtatggatgatgatattccatcaagtgcatcattggtggcg
caaagcggtcgctggagagttgtctcaatggctgacgtggagaaacttggacgagaaaat
ccagttgatgatgttttacctctagcggcagatgttgcagttataatgtacacaagtggg
agtactgggctgcctaagggtgtgatgatgactcatggtaatgtcctagccgtagtttct
tctgtcaggacaattgttcctggccttgaaggcaatgatgtttatctggcttacctgcca
ttggctcatatccttgaaatcgcggcagagaatttagttgcaggtgttggaagtgctata
ggatatggaagcccgttgactctcaccgatacatcaaacaagatcaaaaggggaactaag
ggggatgcaactgtcttaaggccaactgtgatggcagctgttccagcaattcttgatcgt
gttcgagaaggtgtgcggaagaaggttgatgaaaagggtggcattgccaagaaactattt
gattttgcatatgctcgtcgaatatctgcaattaatggtagttggtttggagctaggggc
ttagaaatgcttctgtggaacttcctggtgtttagaaaggttcgggcaattttgggaggt
cgcatccgctttttgctttctggaggtgctcctctttctggtgatactcaaagatttatc
aacatttgccttggggctccaataggccaaggctatggtctcaccgagacttgtgctggt
gggacattttctgagtttgacgatacatctgttggtcgagttggtaatccagtcccttgc
tcatatattaagttagtagattggcctgaaggcgggtatttaattagcgattcaccaatg
cctcgtggggaaatagttattggtggtccaaatgttactctgggatactttaaaaatgaa
gcaaaatcaaaagaggtgtacaaggttgatgagagaggaatgaggtggttttatacaggc
gatattggacagtttcatgctgatggttgccttgaaataattgaccgtagaaaggacata
gtcaagcttcaacatggggaatatgtatccttaggaaaggttgaggctgctctcattgtg
agcccctatgttgacaatatgatgctgcatgcggatccatttcatagttactgtgtagcc
cttattgtggttgcacaacctgttctagaagaatgggcttcaaagaggggaattgcattt
actagttttgcagagttgtgcgagaaagaagaagcaataaaagaagtgcaggcatcactt
gtgaaggcagcaaaggcagcacgactggagaagctcgagatcccagcaaagatcaaattg
ctttctgatccatggactcctgaaactggcttagtcactgcagctctcaagctcaagaga
gaggccatcaggaaggctttctctgaagaactctcgaagttatatgaatag
DBGET
integrated database retrieval system
