Populus trichocarpa (black cottonwood): 7464411
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Entry
7464411 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7464411
KO
K24752
WD repeat-containing protein 70
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7464411
03036 Chromosome and associated proteins [BR:
pop03036
]
7464411
03400 DNA repair and recombination proteins [BR:
pop03400
]
7464411
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
7464411
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
7464411
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
7464411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
7464411
NCBI-ProteinID:
XP_002320613
UniProt:
B9IBC9
LinkDB
All DBs
Position
14:17152686..17157234
Genome browser
AA seq
646 aa
AA seq
DB search
MEEEEAEIYDGVRAQFPLTFGKQSKSQTPLEQIHNTTIRKAPPTSAANAETQSSSSKAWP
DSLRPTPKSSSNPTPSLGPPPLRPTGSNSFVAHVSIGPPRPQARGVDDEDDGEVMVGPPR
PPPGLAAAADDDDDEEEEEEEEDGVMIGPLRPPEPADSDEEDFLYRIPTSNEIVLGGHSK
VVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPSADR
FLCVTGSAQAKIFDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTCGEWHPQAKETILTSS
EDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKRIAGGIGDGSIQIWSLKP
GWGSRPDVFVEKGHSDDITCLKFSSDGQILLSRSSDCSLKVWDLRQMKEALKVFENLPNN
YAQTNIAFSPDEQLFLTGTSFERESKTGGVLCFYNRAKLELVSRVGISLTSSVVQCAWHP
KLNQIFATAGDKSRGGTHVLYDPTFSERGALVCVASAPRKKSLDDFEVQPVIHNPHALPL
FRDQPSRKRQREKTLKDPLKSHKPELPMTGPGFGGRVGASKGSLLTQYLLKQGGMIKETW
MEEDPREAILKYADAAEKDPKYIAPAYAQTQPDPVFAKSDSEDEEK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaggaagcagaaatatacgacggagttagagcacagttccctctaacattc
ggcaaacaatcaaaatctcaaacacctctcgaacaaatccataacaccactatccgaaaa
gcaccacccacctccgccgccaacgccgaaacccaatcctcctcttctaaagcctggccc
gattctctccgtcccacacctaaatcatcctccaaccccaccccttcacttggaccgcca
ccactgcggcctactggttccaattcattcgtcgcccatgtttcgattggacctcctcga
ccacaagctcggggtgtagacgacgaagatgatggggaagttatggtggggcctccgcgg
cctccgccgggactggctgctgctgctgatgatgatgatgatgaggaggaggaggaggag
gaggaggatggtgtgatgattggaccacttcgtccgccggaaccagcggattcggatgag
gaggattttctgtatcggattccaacgagtaatgagattgtacttggaggccactctaag
gttgtttcagctcttgctgtagatcatactgggtctagagttctttctggtagttatgac
tatacagttagaatgtacgattttcaagggatgaattcgcgtttacaatcatttaggcag
cttgaaccatctgaaggccatcaagttcgtaatttgagctggagtccttccgcagaccgg
tttttatgcgtcactggttctgctcaagctaagatatttgaccgtgatgggcttacacta
ggtgagtttgtcaagggggatatgtacattcgtgacttgaagaatacaaagggtcacatt
tctggattgacttgcggggagtggcatcctcaagccaaggagacaattctaacatcatca
gaggacggttcactacgtatatgggatgtgaatgatttcaaaagtcaaaagcaggtcatt
aaaccaaagcttgctcggcctggaagagttccagttaccacatgtgcttgggatcgtgaa
ggaaagcgcattgccggcggcattggagatggttctatacagatatggagccttaagcct
ggatggggaagcaggccagatgtttttgttgagaagggtcattcagatgacatcacttgc
ctcaaattttctagtgatggacaaattttactctcaagaagctctgattgttcactgaag
gtttgggatttgcggcaaatgaaagaggcccttaaagtctttgagaatcttccaaataac
tatgctcaaacaaatattgcatttagtcctgatgagcagcttttcttgactggaacatct
tttgaaagggagagcaaaactggaggtgtattgtgcttttacaaccgggcaaaacttgaa
cttgtttcaagagttggtatttctctgactagcagtgttgtgcagtgtgcttggcatcca
aagctaaatcagatctttgcaacagctggagataaaagccgaggaggaacccacgtacta
tatgatccaaccttcagtgagagaggagctcttgtatgtgttgcatccgcaccccggaaa
aaatctttggatgattttgaggtgcagcccgtcattcacaaccctcatgcactacccttg
tttagagatcagccaagccgaaagcgtcagcgagagaaaacattgaaggatccccttaag
tcccacaaacctgaacttccaatgacaggaccaggttttggtggaagagttggtgctagt
aaaggaagcttattgactcaatatcttcttaagcaagggggaatgatcaaggagacatgg
atggaggaagacccacgagaagctatattgaagtatgctgatgctgcggaaaaagatccc
aaatacattgctccagcatatgcgcaaacccagcctgacccagtttttgcaaagtcggat
tccgaggatgaagaaaaatga
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integrated database retrieval system
