Populus trichocarpa (black cottonwood): 7465612
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Entry
7465612 CDS
T01077
Name
(RefSeq) la-related protein 6B isoform X1
KO
K15191
La-related protein 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7465612
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
7465612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_1
PAM2
Hen1_LCD
Motif
Other DBs
NCBI-GeneID:
7465612
NCBI-ProteinID:
XP_002310383
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Position
7:15373934..15379447
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AA seq
516 aa
AA seq
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MAQQNQEEEEEEVVAIVESVPESLDQSSSSSSSGPSLSRNVSFSKLNAQAPAFVPTRPQS
QPQPPPRMTVIPPPPPPPAAMMHMYPPPSPFHVPIHSPVHLPHVIPVQNHPHHHNHHHNS
HNHLHNHQQHHNQHQQYVPVRNHNQHHQQHNSKKVQQHSDEEVEVIGNKDAAASSDHASK
SDSKSDEAMNKLLNQVEYYFSDLNLATTDHLMRFITKDPEGYVPISVVASFKKVKAAINS
NSQLANILRNSTKLVVSDDGKKVRRQHPLTDSDVEELQSRIVVAENLPEDHCHQNLMKIF
SAVGSVKTIRTCPPQTSGGGASSASRSAKADGMHFSNKLHAFVEYETIEIAEKAVAELND
EGNWRSGLRVRLMLKRGSKSTQARGKKGHDGQGHSEEDEISATEQMPNDKQTEDLSQQHD
AHSHEHSQGEDHANDKEGAQRKGRNRGRGKGRGRGQYHHNNHHNNRGNHLGTSPSNNPVI
GEHPAMAKQPPGPRMPDGTRGFAMGRGKPAAVNNIA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaaaatcaagaagaagaagaagaagaagtggtagcgatagtagaatctgta
cctgaatccctagatcaatcctcttcttcttcttcttctggtccttcgctttctcgtaac
gtgtccttcagtaaactcaacgcgcaagctccagcctttgtccccacgcgcccccaatct
cagcctcaacctccaccacgaatgaccgtgatccctcctcctccgcctcctcccgccgct
atgatgcatatgtatccaccaccttccccgtttcatgttccgattcatagccctgtacat
ttgcctcacgtcatccccgtccaaaaccacccccaccaccataaccaccatcacaacagc
cataaccaccttcacaaccaccagcagcatcataatcagcaccaacagtatgttcctgtt
cggaatcataaccagcatcatcaacagcataattctaaaaaggtgcagcagcactctgac
gaagaggtcgaggttattgggaataaggatgcagctgcttcttcggatcatgcctcaaag
agtgacagtaaaagtgatgaagctatgaataagctcttaaatcaggtggagtactatttc
agtgatttgaacctggccactactgatcatcttatgaggtttattaccaaagatcctgaa
ggatatgtgccaatatctgttgttgcttcctttaagaaggttaaagctgccataaacagt
aattctcagcttgctaacattctgcggaactcaacaaagcttgtagttagtgacgatgga
aagaaagtaaggcgccagcatcccctaactgattcagatgttgaggagttgcaatctcgt
atagttgttgctgaaaatttacctgaggatcattgccaccaaaacctcatgaagatattt
tctgctgttgggagtgtgaagacaattcgtacctgtccacctcaaacttctggtggtggt
gcttcttcagcatctagatctgcaaaagctgatgggatgcatttcagtaacaagttgcat
gcatttgtggaatatgagaccattgagattgctgagaaagcagttgctgagctaaacgat
gagggaaactggaggagtggtcttagggttcggttaatgctcaagcgtgggtcaaaatcc
actcaggcacgaggcaagaaggggcatgatggtcaagggcattcagaggaagatgagatt
tctgcaactgagcaaatgccgaatgataaacagacagaagatctgtcccagcagcatgat
gcccattcacatgagcattctcagggagaggatcatgccaatgacaaggaaggtgcgcag
agaaaagggcgtaaccgggggaggggcaagggacgtgggcgaggtcaataccatcataac
aaccatcacaataaccgtggaaatcatctgggaacttccccttcaaataatccagttatt
ggcgagcatccagcaatggccaagcaacctccagggccacggatgccagatggcactaga
ggatttgcaatgggtcgagggaagccggctgctgttaataatatcgcatga
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