Populus trichocarpa (black cottonwood): 7467924
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Entry
7467924 CDS
T01077
Name
(RefSeq) auxin response factor 19
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
7467924
NCBI-ProteinID:
XP_024445300
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Position
18:7397470..7404909
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AA seq
1102 aa
AA seq
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MKVPSNGFLPNSAEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFVPSYPNLTSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSR
QPTEFFCKTLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLIS
SDSMHIGILAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMF
TTEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVVTP
FYICPPPFFRPKFPKQPGMPNDESDTENAFKRAVPWLGDEFGKKDAASSIFPGLSLVQWM
SMQQNNQFQAAQSGFFPPMVPSNDLQKNLSTDDPSKLLNFQAPGLSAPSIQFNKTNSENQ
VGQLRRPPMAWTQQQQLQQLLQTSINQQQPPYPQQPQPQLQQSISQEQHHEHQHRPQPQQ
QPQPQLQPQQIQQLPPQWQQLQQLQQQIFQPPALNDSVVSPNQIPNQNFQKPFVYSQQQQ
QQQQQLLASNIQSQSIPSPNRSSYQLTSLPQDSQFHQQMEQQSNFSHRQQTQLQQSPLLL
LQQNPSQRVQPQPHQQIQQLSQPDNSEQQLHLQLLQNLQQQQQQQLLSPESLLLQSQKLQ
QQQQTHQQNQQLHQSPLTQNQQPLGSNSFPTAAALMRTQSFPMNQLQGMQNATMAVRYHS
SITDGEAPSCSTSPSTNNWQISPLNFLNRNQQAPAMLMGDSAIEPASNLVQELQSKSEIH
IKNEFPSLKGLDQLKYKGTVTDQLEASSSGTSYCLDAGTIQQNFSAPTFGLDGDVQSHPA
SNIDALAPDTLLSREYDSQKDLQNLLVNYGGTAQDINMELSTAAISAQSFGVSNIPFKPD
GSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRGSVGRSIDITCYKGYDELRHDLARMF
GIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEFMSCVQSIKILSSAEVQQMSLDGDL
GNVPAPNQACSGTDSGNVWRGQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccttcaaatgggttcttgccaaattctgcagaaggagaaagaaagagtatc
aattcagagttgtggcatgcttgtgctgggccactggtttccttgcctccagttggaagc
cttgtagtttacttccctcaaggtcacagtgagcaggttgcagcttcaatgcaaaaggag
actgatttcgtaccaagttaccccaaccttacttccaagttgatttgcatgcttcataat
gtcacattgcatgctgatgtggaaactgatgaggtctatgcacaaatgacccttcaacca
gtaagcaaatatgacaaggaagcattactggcatctgacctggggcaaaagcagagcagg
caacctacagagttcttctgcaaaactcttacagctagtgacacaagtactcacggtgga
ttttttgtacctcgtcgagcagccgagaagattttccctcctctagacttttcaatgcaa
ccacctgctcaagagctggtagccagagacttacatgataatacatggacatttaggcat
atttatcgagggcaacccaaaaggcacctgctcactacaggttggagtgtctttgtcagc
acaaaaagaattttcacaggtgattccgttctattcataagagatgaaaaatcacagctt
ctcttgggtataaggcatgctaatagacaacaaccagctctctcttcgtcacttatatcc
agtgatagtatgcatattggaattcttgctgctgcagctcatgctgctgcaaacaacagc
ccatttactatattttacaacccaagtgcaagcccttctgagtttgtgatccccttctcc
aagtataataaagctatgtatacgcaagggtcacttggcatgagatttagaatgatgttt
acgactgaagagtcaggagtgcgtagatacatgggtacaatcactggtatcagtgatttg
gatccagtgcgctggaaaaattcacagtggcgcaatcttcaggttgggtgggatgaatca
actgccagtgaacggccaaacagagtttcgatttgggagattgagcctgttgtaactcct
ttctacatatgtccacctccatttttcagaccaaagttccctaagcagccagggatgcca
aatgacgagtctgatacagagaatgcttttaaaagagccgtgccttggcttggagatgaa
tttggcaagaaggatgccgcaagctcaatctttcctggtttgagcttagttcaatggatg
agcatgcagcaaaataatcagtttcaagctgctcaatcaggattcttcccaccaatggtt
ccttccaatgacctgcagaaaaaccttagcactgatgatccatcaaagttattgaatttt
caagctcctggcctatctgctccaagcatacaatttaacaaaacaaattcagaaaaccaa
gtcggtcagttacgtcggccaccaatggcatggactcaacaacagcagctgcagcaatta
ttgcagacttccattaaccaacagcagccaccttatccccaacagccgcagccacagctg
cagcagtctatttctcaagagcaacatcatgagcatcagcatcgaccacaaccacagcaa
cagccgcagccacagctgcagccacaacaaatacaacaactgccaccacaatggcaacag
cttcaacagcttcagcagcagattttccaaccacctgccttaaatgacagtgtggtttct
cctaatcagattccaaatcagaattttcagaaaccatttgtatactcccagcagcagcag
cagcaacaacagcagttactggcaagcaatatccaatcccaaagcatcccttctcctaat
agaagttcatatcagctgacctctttaccacaagactcgcagtttcatcaacaaatggag
cagcaatctaacttctctcacagacaacagacacagttgcaacagtccccactcctgttg
ttacaacaaaacccatcacagagggtgcagccacagccacatcaacaaatacagcaacta
tcacagcctgacaactctgagcaacagcttcatttacagttgctacagaacttacagcag
cagcagcagcagcagctgctctcccctgaaagcttacttctgcagtctcagaagctacag
cagcagcagcagacccatcagcaaaaccagcaacttcatcagtcacctctgacacagaat
cagcagccacttggcagcaacagcttcccaacagcagcagcactcatgcgaacacaatct
tttcctatgaaccagctccaaggcatgcagaacgcaaccatggcagttagataccattca
agtattacagatggagaagcgccatcttgttcaacctcaccttccactaataattggcag
atttctccactaaatttcctgaacagaaaccaacaagctccagccatgttgatgggtgat
tcagctattgagcctgcaagtaatcttgttcaagaactccaaagcaagtctgaaattcac
atcaagaacgagtttcccagcttgaaaggtctagaccaactaaaatataaaggtactgtg
actgatcaattggaagcttcgtcttctggaacatcgtattgcctagatgctggtaccatc
cagcagaatttctcagccccaacctttggcttggatggcgatgtccaatcacatcctgca
tctaatatcgatgcattggcacctgatactctattatcaagggaatatgactctcaaaag
gatcttcagaacttgcttgttaattatggtggtaccgcacaagatatcaacatggagttg
tccactgctgcaattagcgctcagtcatttggtgtatcaaacatacctttcaagcctgat
ggttcaaacgacattgccatcaatgatactgggattttgaacaatggagcctggaccaac
cagaatcaacgaatgcgtacatatacaaaggtccaaaagcgtggctcagttggaagatct
attgacatcacctgttataaaggttatgacgagcttagacatgatctggcccgaatgttt
ggcattgaagggcaacttgaagatccacaaagttcggattggaaactggtatatgttgat
cgtgaaaatgacatattacttgttggtgacgatccttgggaggagttcatgagctgtgtt
cagagcataaaaatactgtcatctgctgaagtgcaacagatgagcttggatggagatctt
ggtaatgtgccagctcccaatcaagcttgtagtggcactgacagtgggaatgtctggagg
gggcagtaa
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