Populus trichocarpa (black cottonwood): 7470422
Help
Entry
7470422 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7470422 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7470422
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
7470422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
7470422
NCBI-ProteinID:
XP_024454215
LinkDB
All DBs
Position
4:complement(19307887..19311742)
Genome browser
AA seq
478 aa
AA seq
DB search
MKKRSSADIDQAVVNVWKRELGQLSTRNFAHRFAASEDLVSRLEIHKKLEKHDGCVNTLS
FNAGGDILVSGSDDLRVILWDWETGRDKLSFRSGHDNNVFQANFMPFSDDRTIITCAADG
EIRQAQILEGGEVKTILLGKHEESQVHKLAIEPGSPHIFYSCGEDGVVQHFDLRTRSATE
LFTCLCVDDLKGYRPYVPLNAIAIDPRNPNLFAVGGMDKFAQLYDIRKYKWDGSSDFGQP
ACYFCPQHLIGNEDTGITGLSFSDQSELLVSYGDEFIYLFTQSMGLRNPPFPSSSFMVSM
GSDTSKVEPGSIASSSSMDLDGKNAPQVYMGHRNCETVKGVSFFGPRCEYVSSGSDCGRI
FIWKKRGGELIRVIEADKDVVNCTEPHPHTMALASSGIEYDIKIWTPKAIERATLPTNIG
QLLMANRIDWFGMSDNNDDDDGDSDDSDIDDDFYDDYSDNGGVCDEDDDKFLGSYDEC
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaagcagcgcggacatcgatcaagcagtagttaatgtttggaaacgcgaa
ctcggccaactctccactcgcaatttcgctcaccgcttcgccgcttccgaggatcttgtg
tcgaggcttgaaattcacaagaagttagagaagcacgatggatgtgtaaacacgctgagt
ttcaatgcaggtggtgacattttggtgtcgggctcagatgacctgcgggtgattttatgg
gattgggaaactgggcgtgataagctttcctttcgttcgggtcatgataataacgtgttt
caagccaacttcatgcccttttctgacgatcgaactattattacttgtgctgctgatggc
gagattcggcaagctcaaattctggaagggggggaagtgaagactatattgctaggaaaa
catgaggaatcacaagttcataagttggctattgagcctgggagtcctcatatattctat
tcttgtggcgaggatggagtggttcaacattttgatttgagaaccagatctgccacagaa
ctttttacttgcctttgtgttgatgatttgaaggggtatcgtccatatgtccctctaaat
gctattgctattgatccaaggaacccaaatctctttgcagttgggggaatggataagttt
gctcaactttatgacatccgcaagtacaagtgggatgggtcaagtgattttggtcaacct
gcatgttatttctgtcctcagcatttgattggtaatgaagatactggaatcacaggcttg
tcattctcagatcagagtgagcttctagtctcatatggtgacgagttcatctatcttttt
acacaaagcatgggtttgagaaatcctccatttccatcctcttcatttatggtttcaatg
ggcagtgatacaagcaaagtagaacctggatctatagcttcttcatcatctatggatctg
gatgggaaaaatgccccccaagtttatatgggccacagaaattgtgagactgtgaagggt
gtgagcttttttgggccaagatgcgagtatgtttctagcgggtctgactgtggtcggatt
tttatttggaagaaaaggggtggagagcttattcgtgttatagaagcggataaggatgtg
gtaaattgtactgagccccatccccataccatggcacttgctagcagtggaatcgagtat
gatataaaaatatggaccccaaaagctattgagagagctactctgccaacaaacattgga
cagcttctgatggccaatcgcattgattggtttggcatgagtgacaacaacgacgacgat
gatggtgacagtgatgacagtgatattgatgatgacttttacgatgattatagtgacaac
ggtggcgtttgtgatgaggatgatgataaatttcttggcagttatgatgaatgttga
DBGET
integrated database retrieval system
