Populus trichocarpa (black cottonwood): 7470967
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Entry
7470967 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7470967
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA
zf-HC5HC2H
AAA_lid_3
zf-HC5HC2H_2
AAA_16
AAA_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
7470967
NCBI-ProteinID:
XP_024437445
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All DBs
Position
11:17166138..17174944
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AA seq
1913 aa
AA seq
DB search
MQLKSGSGLGSSSSPTGARLRKKHKRLDAICETVYNQNHSESLNEEKSGSGQAADLELRR
SSRVRRAPELLDVSPPPAKKRKKMKKKVNLGVSKSYRSGNSSYKIGNSSLRSGNSSSKRV
MEEEEEDSEGEEDLDDTPGSWRSRLRTRGRNAGKGGSSGESRRRKLFDDMEAGESELGEG
EGGFDGGKFVMGSKRVGRVKALSGLESEEKEGGNGHGSGNVSENDEDEEGEEDDEMEVVR
SEDSDESVLDLGGEIDGGNEEEIGDDDGVKVKGEEEKERLDGLELERKGDGNENVENVED
DEKMEELVMMDAENERDVDEVNGALVNELEDGQCGADEIKKDDVENVDLTKGVEDRGCCD
KNEKDVVEEYVDLTKQVENKGGLDELEGEKDVKVDKMKRDSTSSLGRSKIKQGRCCGLCG
CGNDGKPPKRLVQDGGESENEAYSGSSASEDVKYDVWDGFGDEPGWLGRLLGPINDRYGI
AGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGKALKCSRCGRPGATIGCRVDRCPKTY
HLPCARATGCIFDHRKFLIACTYHRHLFQPYGNQHAIRIKKLKAKKMKLQLRKVSNDAWR
KDVEAEEKWLENCGEDEEFLKRESKRLHRDLLRIAPVYIGGTDGGKLFEGWESVAGLQNV
IQCMKEVVILPLLYPEFFSNLGITPPRGVLLHGYPGTGKTLVVRALIGSCARGDKRIAYF
ARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPCRSRQQDQTHSSVVST
LLALMDGLKSRGSVIVIGATNRPEAVDPALRRPGRFDREIYFPLPSVGDRAAILSLHTRS
WPKPVTGSLLKWIARGTVGFAGADLQALCTQAAIIALKRNFPLHEMLAAAGNRSPGAKRI
PLPAFVVEERDWLEALACSPPPCSRREAGIAAYDLVSSPLPTHLIPCLLQPLSTLFVSLY
LHEHLWLPPTLLKAAKMFESLIVSSLEKNNLPTDRWWSHIDSFLREADVAKEIWRKLSCA
GILTREVIGADTDAFAEETDAESVQVEPSAVHNRGMHTSLFREVSFASSKKSGFRVLIAG
SPRSGQKHLSSCFLHCFVGNVEIQKVDLATVSQEGHGDMVQGITRILMKCASFQSCMIFL
PRIDLWAVETCHKVNDDGDASSINHQVYEEKESSLTNSQVVEEENESPIHQCIPAEMTEP
QNAAQSISPAWSSFVEQVESISVSTSLMILATSELPSSELPQRVRHFFENNSSNSRHSTP
LEHTVPRFPVHIDGNFNHDTVISLSAEALLRDIIQPFVQLIHLKAHIPTNIPKHHKTCDS
ILACSNAEYDNQNLCSVVKNEAGTQCPHGPLNVPPPPNNRSLKGKSSMLLAISTFGYQVL
RYPHFAELCWVTSKLKEGPCADVSGPWKGWPFNSCIIRPCNSLDKVAAACSSGNIKSKER
SGLVRGLLAVGLSAYKGEYNSLREVSFEVRKVLELLVGQVNEKIQAGKDRYQYVRLLSQV
AYLEDVVNSWAYALQSLEPDTQVKVANAKLKTMEFPGNDTCADNSVERQHKGDTPDRNFH
ETERLEESPKGFSDKNQEGGESNKVENGFCDLNPEDRAILSEDGSEQHTILCEGAKTDNH
QNSPADNQLVGNITNEQNGTSHRQSEPEITKNLAVTDGNSETLKHSNGYTLTEPAPFSEN
GLCNSGELGALKLSDPGSSCNQSNGLAAEGMVTFDDTEPNHSEHAEDIDVSPVETSCPPN
SGFVCLYRCCSVCLNAVHDMIQKFLACKLALNKSNLTVEDVHDAVASLSVDLLSVIRKID
ITEEISNSFKESSDRNPERYDGFSELHSCQCKSSEDSSIVPTECGCHSVFESVTVKASHS
PGSQFGLDPKFIFRDGILVLVDTTEDVSFHCKYETLCLCSLVKSVAMMKQPFG
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaaatcgggttcgggtttgggttcgagttcttcgcctacgggcgctaggctt
cgaaagaagcacaagagactcgatgcgatatgtgaaaccgtgtataatcagaaccatagc
gagtccctcaatgaggaaaaatccgggtcgggtcaggctgctgacttggagctccgacgg
agttcacgggtcaggcgggcacctgaactgctcgatgtgtcaccgccaccggctaagaaa
cggaagaagatgaagaagaaagtgaatttgggtgttagtaaaagttataggagtggtaat
agcagttataagattggcaatagtagtttaaggagtggcaatagtagttcgaagagggtt
atggaggaggaggaggaggatagtgaaggagaagaggatttggatgatacgccggggagt
tggaggtcgaggttgaggacaagagggaggaatgctgggaagggagggagcagtggggag
agtaggaggaggaagctttttgatgacatggaggcgggggagagtgaattgggtgaggga
gaggggggttttgatggtggcaagtttgttatgggttcgaagagggtagggagagttaag
gcattgagtgggctggagagtgaggagaaagagggtgggaatgggcacggtagtggaaat
gtgagtgagaacgatgaggatgaggagggtgaggaagatgatgagatggaggtggtgagg
agtgaggatagtgatgagagtgtgctggatttgggtggtgaaattgatggtggaaatgag
gaggaaataggggatgacgatggtgtgaaggtaaagggagaggaggagaaagagagattg
gatggtttggaattggagaggaagggtgatggaaatgagaacgtggaaaatgtagaggat
gatgagaaaatggaggagttggtgatgatggatgcggaaaatgagagggatgttgatgag
gttaatggggctttggtgaacgaattggaggatggacaatgtggtgctgatgagattaaa
aaggatgatgtggaaaatgtagatttgacaaaaggggtggaggacagagggtgctgtgat
aaaaatgaaaaggatgttgttgaagagtatgtagatttgacaaagcaggtggagaacaaa
ggtggattggatgagctagagggtgagaaagatgtgaaggtggacaaaatgaagcgtgat
tcaaccagtagtcttggcagatcaaagattaaacagggtagatgttgtggtttgtgtggg
tgtggaaatgatggtaaaccacctaaaaggttggtgcaagatggcggtgagagtgaaaat
gaggcatatagtggttcatcagcttcagaggatgtaaaatatgatgtatgggacgggttt
ggtgatgaaccagggtggcttggtcgtctcttgggtcctataaatgatcgttatggtatt
gctggaatctgggttcatcaaaactgtgctgtatggagtccagaggtttattttgctggc
ttgggttgcttgaaaaatgttagggctgcactttgcagaggcaaagcattaaaatgtagc
cgctgtggaaggccaggggcaactattggatgtcgtgttgatcggtgtccgaaaacttac
cacttgccttgtgcacgagccactggctgcatttttgaccatcgaaaatttcttatagca
tgcacatatcatcggcatctcttccaaccttatggtaatcaacatgcaatacggataaag
aaattgaaagctaagaaaatgaagttacaattgagaaaggtttcgaatgatgcttggcga
aaggatgttgaagcggaagaaaaatggttggagaactgtggcgaggatgaagagttttta
aaacgtgaaagcaagaggctccatcgggatttgttgagaattgcacctgtgtacattgga
ggcactgatggtggaaaactatttgagggctgggagtctgttgcagggcttcagaatgtc
atccaatgcatgaaggaagtggtaattttgcctctattatatcctgagttcttcagtaat
ttagggattacacctcctaggggtgttcttttgcatgggtaccctggaacaggtaaaact
cttgtagtacgggcattaattggttcatgtgctcgtggtgataaacgaatagcatatttt
gctcgcaaaggtgcagactgcctaggaaagtatgttggggatgctgagcgccaactgagg
ctcctgtttcaggtcgctgaaagatgtcaaccttcaattatattcttcgatgagatagat
ggattagcaccttgtcgttcaaggcagcaagaccagactcacagctcagttgtatccaca
ctgcttgctcttatggatggtttaaaatcccggggttcagtaatagtgattggtgcaacc
aaccgtcctgaggctgttgatccagcattacgtaggcctgggagatttgatagggagatt
tactttccattgccatcagttggggacagggctgctattctctccctccacacacgaagt
tggcctaaacctgttactgggtctttgctgaagtggattgcaagaggaactgtaggtttt
gctggtgctgatctgcaggctctttgtactcaagctgctattattgctttgaagaggaat
ttccctttgcacgaaatgctagctgctgcaggcaatagatctcctggtgctaaacgcatt
cctcttccagcttttgtagtggaagagagggactggttggaggctttagcttgttcccca
cccccttgctctcgtagagaagcagggatagctgcttatgatttggtctcctcccctctt
cccactcacctcattccatgtcttttgcagccactatctaccttgtttgtttcattgtat
ctgcatgaacacctctggctgcctcctactcttttgaaagctgcaaaaatgtttgaatct
ctgattgtttcttctttagagaagaataatctgcctactgatcgttggtggtctcacatt
gacagtttccttagagaagcagatgttgccaaggaaatatggaggaaactttcatgtgct
ggcatattaactagagaggttattggtgctgatactgatgcttttgcagaagaaactgat
gctgaaagtgttcaggttgaaccttctgcagttcataataggggcatgcacactagttta
tttcgagaggtttcttttgcatcgagcaagaaatctggatttcgagtattgatagccggg
agtcccagatctggccagaagcatctttcttcttgctttcttcattgttttgtcggaaac
gttgaaattcagaaggttgatctggctactgtttcacaagaggggcatggtgatatggtg
caaggaataacaagaatattaatgaagtgtgccagtttccaatcatgcatgatattcctg
ccaagaattgatttgtgggctgtggagacatgtcataaagttaatgacgacggtgatgca
tcttcaattaatcatcaagtttatgaggagaaagaatcctctttgacaaacagtcaagtt
gtggaagaggaaaatgagtcacccatccatcaatgtataccggctgaaatgacagaaccc
caaaatgctgcccaaagtatatcacctgcctggagctcatttgttgagcaggtggaatcg
atatccgtgtcgacttccttgatgattctggctacctcagagcttccatcctcagaactt
ccccaaagagtaaggcatttctttgaaaacaatagctcgaatagcaggcattcaactcca
ttggagcacacagtaccccgatttcctgtgcatattgatgggaatttcaaccatgataca
gtgatcagtctttcagcagaagcattattgagagacataattcaaccatttgttcagttg
attcatcttaaagctcacatccctacaaatatacccaaacatcataaaacttgtgattcc
attcttgcttgttcaaatgcagaatatgacaatcaaaatctttgttcagttgttaaaaat
gaggctggcacacaatgtcctcatggtcctttaaatgttccaccaccacccaataataga
agtttgaaaggaaaatcaagcatgttgttggcaatctctacatttggctatcaagttctg
cggtatcctcattttgctgaactctgttgggttacatctaaacttaaagaaggtccttgt
gcagatgttagtggtccttggaagggatggcctttcaattcttgcattattcgtccctgt
aactcattagataaggtggctgctgcttgtagctctggcaatattaaaagcaaagagaga
tcaggtttagtcagagggttacttgctgttggtttatcagcatacaagggtgagtacaat
tcacttagagaggtctcctttgaggtaaggaaagttcttgagcttctagttggacaagtt
aatgaaaaaattcaggctgggaaagatagatatcaatatgttcgtcttctatcacaagtg
gcttacctggaagatgtggtaaacagctgggcatatgcactgcagagtttagagcccgac
actcaagtgaaagtggcaaatgctaaactgaaaaccatggaattcccaggtaatgatacc
tgtgcagataattctgttgaaagacagcacaagggagacactcctgatagaaacttccat
gaaactgaaaggctggaagaaagtcccaaggggttttctgataaaaatcaggaaggaggt
gaatcaaataaagtagaaaatggtttttgtgatcttaaccctgaggacagagctattctt
tcagaagatggatcagaacaacataccatcctctgtgaaggtgccaaaactgataaccat
caaaattctcctgctgataatcagttggttggtaatattacaaatgagcagaatgggacc
tctcacagacaaagtgaacctgaaattactaaaaatcttgcagttactgatggaaattca
gaaaccttgaaacattctaatggatatacactcacagaacctgcccccttttctgagaat
ggtctctgcaattcaggtgaattgggtgccttgaagctctctgaccctgggagctcctgc
aatcagagtaatgggttggctgcagagggaatggtaacatttgatgatactgaacctaac
catagtgagcatgctgaagacattgacgtctctccggttgaaactagctgtcctcctaat
tctggctttgtgtgtttgtatcgctgctgctctgtatgtcttaatgctgtacacgacatg
attcagaaattccttgcttgtaaattggcattaaacaagagcaatttgacagtagaggat
gttcacgatgctgttgcatcattgtcagtggatcttctttcagtgattagaaaaattgat
attactgaagaaatcagcaattcattcaaggaaagctctgatagaaatcctgaaagatat
gatggcttctcagaattgcatagctgtcaatgtaaaagttctgaagatagttcaattgtc
ccaacagaatgtggttgtcactctgtgttcgaatctgtaactgtgaaagcaagtcattcg
ccaggctcccagtttggacttgacccaaaattcattttcagagatggcattcttgtcctt
gtagataccaccgaggatgtttctttccattgtaaatatgagactttgtgcctttgttct
cttgtaaaatcagtagcaatgatgaagcaaccttttggttga
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