Populus trichocarpa (black cottonwood): 7471118
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Entry
7471118 CDS
T01077
Name
(RefSeq) acetate--CoA ligase CCL3
KO
K01913
acetate/butyrate---CoA ligase [EC:
6.2.1.1
6.2.1.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00010
Glycolysis / Gluconeogenesis
pop00620
Pyruvate metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop00650
Butanoate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
7471118
00620 Pyruvate metabolism
7471118
00630 Glyoxylate and dicarboxylate metabolism
7471118
00650 Butanoate metabolism
7471118
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7471118
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
7471118
6.2.1.2 medium-chain acyl-CoA ligase
7471118
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
7471118
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7471118
NCBI-ProteinID:
XP_002311397
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Position
8:6844095..6848382
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AA seq
566 aa
AA seq
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MGKTRDIDDLPKNPANYMSLTPLWFLERAATVHPTRTSIVHESVQYTWQETYQRCCRFAS
ALSNRSLGLGRTVAVIAPNVPALYEAHFGVPMAGAVVNCVNIRLNAQAIAFLLGHSKSEV
VMVDQEFFTLVEEALKIWEGNEKNFKPPLLVVIGDKSCDPKSLEYALGRGAIEYEKFLES
GDPEFDWKPPEDEWQSIALGYTSGTTSSPKGVVLSHRGAYLMCLSNPVIWGMDEGAIYLW
TLPMFHCNGWCFTWTLAALCVKSICLRQVTAKAIYSAIAYAGVSHFCAAPVVLNTIINAS
KEETILPLPRLVHVMTAGAAPPPSVLFSMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDS
LPPIKQARLNARQGVRYVGLERLDVVDTKTMKPVPADGKTMGEIVMRGNVVMKGYLKNPK
ANEEAFANGWFHSGDLGVKNPDGYIEIKDRSKDIIISGGENISSLEVENVLYMHPAIYEV
SVVARLHERWGESPCAFVTLKPEMEKSDKQQLIDDIMKFSRSNMPAYWVPRSIVFGPLPK
TATGKIQKHVLRAKAREMGPIKESKL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgagagatatcgatgatctaccaaaaaacccagcaaactacatgtctttg
accccactatggttcctggagagagctgccactgtacaccctacaagaacatctattgtc
catgaatcagtacagtacacgtggcaagaaacttaccaacgttgctgccgatttgcttct
gctctgtccaaccgctctcttggccttggtcgcacggtggctgtaattgcacctaatgtc
cctgctttatatgaagcacattttggagttccaatggcaggagctgttgtaaactgcgtt
aatattcgtttaaatgctcaagctattgcttttcttctaggtcattcaaaatctgaagtt
gtgatggtggaccaagagtttttcactctggtggaggaagctttaaaaatctgggaaggt
aacgaaaagaattttaaacctccactattggttgtcataggtgataaaagctgcgatcca
aagtctctggaatatgctttaggaagaggagccattgaatatgagaagttccttgaaagt
ggtgaccctgagtttgattggaaaccacctgaggatgagtggcagagcattgccttgggt
tatacttctggtacaacctccagccccaaaggagtggtgctgagccaccgtggagcatat
ctcatgtgcttgagtaatcctgttatttgggggatggatgaaggggctatttatctgtgg
actctgccgatgttccattgcaatggttggtgttttacttggacacttgcagccctttgt
gtgaaaagtatatgccttcgacaggtaacagctaaggcaatctattcagccatagcatat
gccggcgtcagtcacttctgtgctgcacctgtggtacttaacaccataatcaatgcttca
aaggaggagactatccttcctctaccccgtttggttcacgtaatgacagctggtgctgcc
cctcccccttctgtactcttctctatgtcagaaaaaggcttccgcgtgacacacacctat
ggactctcagaaacttatggcccctccacagtgtgtgcatggaagcctgagtgggactcg
cttcccccaataaaacaagcccgtctcaatgctcgccaaggtgttcgatatgttggcttg
gagaggctagatgttgttgacactaaaaccatgaaacctgtccctgcagatggaaaaacc
atgggagaaatcgtgatgagaggcaatgttgtgatgaagggctacttaaagaacccaaaa
gccaacgaggaagcttttgcaaatggatggtttcattccggggatcttggtgtaaagaat
cctgatggatatatagaaattaaggatagatcaaaggacattatcatctctggaggtgaa
aacataagtagcttggaggtggaaaacgtattgtacatgcacccagctatctatgaggta
tcggtggtagctcgactacatgagcgctggggcgagtcaccgtgtgcttttgtgactttg
aaacctgaaatggaaaaatctgataaacaacaattgattgatgatataatgaagttttct
cggtcaaatatgcctgcttactgggttccaagatcaatagtgttcgggcctctgccaaaa
acagcgacggggaagattcagaaacatgtcctcagggccaaggcaagagagatgggacct
atcaaggagagtaagttatag
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