Populus trichocarpa (black cottonwood): 7472995
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Entry
7472995 CDS
T01077
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7472995
03036 Chromosome and associated proteins [BR:
pop03036
]
7472995
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
7472995
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
7472995
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
7472995
microRNA pathway
RISC loading complex
7472995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
7472995
NCBI-ProteinID:
XP_024450294
LinkDB
All DBs
Position
1:complement(22065954..22072648)
Genome browser
AA seq
985 aa
AA seq
DB search
MSRRGGGRRSSEPRPDQGSSTPSPSFQRGGGGDRGRGRGRRGGFTPAPSPTPVRAPPPAA
SGYLSATAGPSTSSTPQEMASSSNAPPPSASSSASMEELSQEIAKKLSFGSTSATGGSVP
VSSKAIVPPPRPQLGRIGRKCTIRANHFVVEVSDRDLFHYDVAITPEITSKKVNRDVISQ
LVRSYRESHLGNRMPAYDGRKSLYTAGALPFEAKEFVVKLVEKNDPASSSSSVKKERQFN
VAIKYASKVDMHHLKEFLSGRQKDVPQETIQILDIVLRASPSEKYVTVGRSFFSLDLGKK
GELGNGIEYWRGYYQSLRPTQMGLSLNIDVSARSFYEPILVTEFVAKYFNLRDLSRPLSD
QDRVKVKRALRGIKVEISYRDYARSFKVTGISNLPVDKTMFTLDDKKTKVSVHQYFWDRY
NIGLKYTSLPPLQAGTDAKPIYLPMELCKIAGGQRYTKKLNERQVTALLRATCQRPSARE
NSIKEMVAHNDYSRNVLVRNEFGIQVKEELTSVDARVLPPPMLKYHDTGREARVDPHLGQ
WNMINKKMVNGGKIDFWTCVNFSTRVQRDLPFEFCWQLMDMCNSKGMEFHPDPIIQIHSA
DSRHIEKALHDVHKKCTAKLANQKGKQLQLLIIILPDFSGSYGKIKRICETELGIVSQCC
QPQQAKKLSKQYLENVALKINVKAGGRNTVLNDAIQRRIPNVTDLPTIIFGADVTHPQPG
EDSSPSIAAVVASMDWPEVTKYRGLVSAQAHREEIIQDLYKKYQDPQKGLVHSGMIRELF
IAFRRSTGQKPHRIIFYRDGVSEGQFSQVLLHEMQAIREACGTLEEGYCPPVTFVVVQKR
HHTRFFPADHSKRDLTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVL
FDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDSGSTG
ATGRSVEARSLPVVKENVKDVMFYC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggtggccggagatcgtcagaacctcgccctgaccagggctcctca
actccgtcaccgtcttttcagcgcggtggtggtggagatcgtggtagaggccgtggccgg
agaggcggcttcactcctgctccgtctccaacacctgttcgtgctcccccccctgctgca
tccggctacctttctgcaaccgcaggtccgtccacctcatcaactccccaagaaatggca
tcatcttcgaatgcgccaccgccctcggcttcgagttcggcttcgatggaggagctgagt
caagagatcgcaaaaaaattgtcatttggaagtactagtgcgacgggagggtcggtgcct
gtgtcatcaaaggccattgtgcctccgccccggccacaacttggaaggataggaaggaaa
tgtacgattagagcaaatcattttgtagttgaggtttctgatagagatctctttcactac
gatgtggcaataactcctgaaattacatcgaagaaagtaaatagagatgtaatatctcag
cttgttcgttcttatcgtgagtcccacctgggcaataggatgccagcttatgatggcagg
aaaagtctatacactgctggggcattgccttttgaagcaaaggaatttgtcgtgaagttg
gttgagaagaatgatcctgctagttcatccagttctgtcaaaaaggaacgtcaatttaac
gtggcaatcaaatatgcatccaaagttgatatgcatcatttaaaggaattcctaagtggc
agacaaaaggatgttccacaggaaaccatacaaatccttgacattgttctcagagcatca
ccatcagaaaagtacgttactgttgggaggtcattcttctcacttgatttgggcaaaaaa
ggcgagcttggtaatggaatagaatactggagaggttactatcaaagtcttcggccaacc
caaatgggactctctttaaatattgatgtgtcagccagatccttttatgagccaattttg
gtgactgagtttgtggccaagtacttcaatctcagagacttgtcaaggcctctttctgat
caggatcgtgttaaggtgaaaagggccttaagaggaatcaaagtggaaatttcatacagg
gactatgccagaagcttcaaggttactggcatatctaatctaccagtagacaagacaatg
tttactctggatgataagaaaacaaaggtgtctgtccatcagtatttctgggacagatac
aatattgggctgaaatatacatctttgcctccccttcaagccggaactgatgcgaaaccc
atttatttgcccatggagctctgtaagattgctggaggacagcgatacacaaagaaacta
aatgaaagacaagtcactgcacttttaagagctacctgtcaacgcccttctgctagggaa
aatagcattaaggagatggttgcgcataacgattatagtaggaatgtgcttgtaaggaat
gaatttggtattcaagtgaaagaagaactaacatcggttgatgcccgagttttaccccca
cccatgcttaaatatcatgatacagggcgagaagctagagtggatccacacttgggacaa
tggaatatgattaacaagaaaatggtgaatggtggcaaaattgatttctggacgtgtgtg
aacttttctacgagagtgcagagagacttgccatttgaattttgttggcaattaatggat
atgtgcaacagcaaaggaatggaattccacccagatcccattattcagatacattcagct
gattccaggcatattgagaaggctcttcatgatgttcataagaaatgtactgcaaaactt
gcaaatcagaaggggaaacagcttcaactgctgatcattattctacctgatttcagtgga
tcctatgggaaaatcaaacgtatttgtgaaactgagttgggaatagtttcacaatgctgc
cagccccagcaggcaaagaagctcagcaaacaatacctggaaaatgttgctctcaaaatt
aatgtgaaggctggtggacggaacactgtgttaaatgatgctattcaaagaagaattcct
aatgttactgatcttcctactattatttttggtgctgatgtgacccatccacagccaggg
gaagactctagcccgtcgattgcagcagtagtggcttctatggactggccagaggtaacc
aaatatagaggacttgtctctgcacaggctcatcgcgaggaaattattcaggatctttac
aaaaaatatcaggatccacaaaagggtttagttcacagcggaatgatcagggagctgttt
attgcattcagaagatcaacgggccaaaaacctcatagaattatattctatagagatggt
gtaagtgaaggccaattcagccaagttctgctacatgagatgcaggcgatacgagaggca
tgtggcaccctggaagaaggatattgtcctccggttacctttgttgtagtgcagaaacgg
catcatacacgcttctttcctgctgaccatagcaagcgagatctgactgacaggagtggc
aatatcctaccaggcacggtcgtggacactaaaatttgccaccctacagagtttgatttc
taccttaacagtcacgctggaattcagggaactagcagacctacacactaccatgtattg
tttgatgaaaacaacttcactgctgatggcttacaaaccctcactaacaatttgtgctac
acgtatgcaagatgcactcggtctgtttccatagtgccccctgcatattacgcccatttg
gcagcttttagggctcggtattacattgagggtgaaacatcagacagtggttctactggt
gcgactgggaggagtgtggaggcccgatctcttccagtcgtcaaagaaaatgtcaaggat
gttatgttttactgttga
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