Populus trichocarpa (black cottonwood): 7473563
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Entry
7473563 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7473563
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7473563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7473563
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
7473563
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
Other 90S particles
7473563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
7473563
NCBI-ProteinID:
XP_002307982
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All DBs
Position
6:2719689..2722219
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AA seq
284 aa
AA seq
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MVRPYGKGHKKRKKGERYDKEEEEVEEEQVEEEKADSETEMRAQDGEEKTEEEKEMQLPG
VEEGIPIVPSHQTGKKPGVIFVLEKASLEVAKVGKSYQILNSEEHANFLRRNKKNPADYR
PDIIYQALLSILDSPLNKAGRLRAVYVKTDKGVLFEVKPHVRIPRTYKRFAGIMLQLLQK
LSITAVGNREKLLRVIKNPVTQYLPLNSRKIGFSHSSEKLVQMEKYVAGVGDDTDLVFVV
GAMSHGKIECDYVDDFISVSEYPLSAAWCIARVCEAVSKKWRVL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccttatggtaaagggcacaagaaaaggaagaaaggggagaggtatgataag
gaagaagaggaagtggaagaagaacaagttgaagaagagaaagctgatagtgagactgaa
atgagagctcaagatggcgaagaaaaaacagaagaggaaaaagaaatgcaactgccagga
gtggaggagggcattcctattgtcccaagtcatcaaactggcaagaaacctggggttata
ttcgtgctcgaaaaggcttctttggaagttgcaaaagttggaaagagttaccaaattttg
aattctgaggagcatgccaatttcctgcggaggaataaaaaaaatcctgctgattacaga
cctgacattatttatcaggctctcctatccatcttagatagcccattgaataaggctggg
cggttgagagctgtatatgtgaaaacagataaaggtgttctttttgaagttaagccacat
gttcgtattccgaggacttacaagcgttttgccggtattatgttgcagctgctacaaaaa
ctgagtataactgctgtcggtaatcgtgagaagcttttgcgtgtgatcaagaatcctgta
acccaatacctgccattaaactctcgtaaaataggcttctcccatagctcagaaaaattg
gtccaaatggagaagtatgtggctggagttggtgatgacaccgaccttgttttcgtggtt
ggtgctatgtcccatggtaaaattgaatgtgattatgtagatgacttcatatcagtgtct
gaatatccgctgagtgctgcctggtgtattgcaagggtatgcgaggctgtgtcgaagaag
tggcgtgtgctgtaa
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