Populus trichocarpa (black cottonwood): 7475967
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Entry
7475967 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7475967 isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7475967
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
7475967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
7475967
NCBI-ProteinID:
XP_024466754
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Position
10:complement(3081290..3091278)
Genome browser
AA seq
1099 aa
AA seq
DB search
MDPDLDPFDDILPKPALTNVARLGGKFQPKAKPRPKKVEFVPIPFPPSKAKEKAVAASQT
SLDTNISVQPFGIMDEKLTCQIGSLSPSSPTGTKEPLKSNDGKTKLVEESGSPLATSDMV
GVKEPLKYKEGLSSWEIGSLEAANLSPAGINDAGSVGAMDSEAAISGCNDDQESSFVKSA
GVAGSLGFDSDLLDDILPKSLKNNSRAGGKFKPKAKPRQRNENPAPVSSSPSKCAEEEPK
AHSQQTQSTEPVDVANTRMNPDGPTLLQQGNVKSNEPSKDSEVLYFNDNSCMELVNPSSE
NIATEEDVSPQNTPLAEMKSGNDVGLNSRFVESAIEVGSMRLDLDAFDYMDPQPAISTGR
AAGKLQSKVKARPRKGTSELAASAVPNTAVEKVAGLASTVLDNMLPVESSGVENGRLTDH
VSEPNMESAGTKEPGRNNGQALLSPPEILATVFCQKDSKGKSSFPAQNFVDSSAFMKCNV
VATDFSSPNEAAVQVDNGRLELEFQESGAFPGLETPGFLSPDVMESVMAPPPNVQPVPSE
TINIDGCSVAAFPSDNIVDSPCTHLGDFIPPDPCTSEIRMNQELKNLTETSRSDNVTAIH
QEDASDLPEKETSSSRKRKAAPVSCSSWKSQKASLAGDMNEHDKSSRHLTKQAAAPQLGD
EPEYEAHGNDDSSMHPGDFLPFDPCTSEFQVDQNQKDFTESNCLANANVVRSEDVPVVPE
KESSKSGKRKVFSASNCSRKSKKSSLAAGPQVVDELDEAHDNGGLPEPPGSSVDEEDNDY
EPRGDEESDDENKVEIASRKKRASKKSKEPVTENEKPVRKRNRSNDTSEQSMQKPRKKFS
HSTRRNKRCVNKDLLNMPEDEIDFKRLPIRDIILFAEYKERLATTTSKIPPNNQSTDNPF
HGEYSHNEEDGFASEQDITHGDDQTYVRAQPSSSLFNYQSFMDRAPNSRWSKQDTELFYE
GIQQFGTDLSMIQQLFPGRTRHQVKLKYKKEERQHPLRLHEALSSRPKDNSYFEKLIEQL
QEVAGTQEEQESYKDDLVDVSGEEDAELNAETSGEVTKPEQGENAGVEEEQEKNVAEDHH
GPLKSGVSDEDVDDIWGSY
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgatttggacccttttgatgatattcttcctaagcctgccttgactaatgta
gctaggttaggtgggaagtttcagcctaaggccaaaccacgaccaaaaaaggtggaattt
gtaccaattccttttcctccaagtaaagccaaggaaaaggctgtggcagcatcgcaaact
agcttagacacaaatatttctgttcagccttttggtatcatggatgagaagttgacatgt
caaattggttcgttgtctccatcatcacctactgggactaaggaacccttgaaaagcaat
gatggaaaaacaaaattggttgaagagtcagggagtcccttagccacctctgacatggtt
ggggtcaaagaacctctgaaatataaggaaggtttgtcctcttgggaaataggaagcttg
gaggcagcaaacctctcccctgctgggataaatgatgcaggctctgttggtgctatggat
tcggaggctgcaatatctggttgtaatgatgaccaggaatctagctttgtgaaatcagca
ggagtggcaggctcattggggtttgattcagatctactggatgacattcttcctaaatct
ctaaaaaataattctagggctggcgggaaattcaagcctaaggctaaacctcggcaaaga
aatgaaaatccagcacccgtctcttcatctccatctaaatgtgccgaggaagaacctaag
gcacattctcaacaaacacaatccacagagcctgttgatgttgcaaatacaaggatgaac
ccagatggtccaactttacttcagcagggcaatgttaagagtaatgagccatcaaaagac
agcgaagttttatatttcaacgacaacagctgcatggaattagtcaacccctcatctgaa
aatattgcaactgaagaggatgtgagcccccaaaatactccgcttgcagagatgaagtct
ggaaatgatgttggcctgaattctaggtttgtagaatctgccatagaggttggttccatg
agattagatttggacgcttttgattatatggatcctcaaccagccatatcaactgggagg
gctgctggcaagttacagtcgaaggtaaaggcccggcctaggaagggaacatctgagtta
gctgcttctgctgttcccaatactgcggtagaaaaggtggcgggtctagcttccactgtc
ttggataacatgctgcccgttgaatcttctggtgttgaaaatggtagactaaccgatcat
gttagtgagcctaatatggagagtgctgggaccaaagagccagggagaaacaatggccag
gctcttctttctcctccagaaattttagctactgtcttttgtcagaaggactcaaaggga
aaatccagctttcctgcacaaaattttgttgattcttcagcattcatgaaatgtaatgtg
gtggcgacagatttttcaagtcccaatgaagctgctgttcaggttgataatggaaggttg
gaattagagtttcaggaatcaggggcatttcctggcttggaaactccaggtttcttgtcc
ccagatgtcatggagtctgttatggccccaccaccaaatgttcaacctgttccttctgaa
accataaacattgatgggtgttcagttgctgccttcccatcagataatattgttgattcc
ccatgcactcacctaggtgattttattcctccagatccttgtacttctgagattcgaatg
aaccaagaactgaaaaaccttacagaaacttctcgctcagataatgtgactgctatccat
caggaggatgcctctgatttgccagaaaaggagacttctagtagtagaaaaagaaaggct
gctccagtatcatgtagttcttggaagtctcaaaaagcttccttagctggtgacatgaac
gaacatgacaaatcatcaaggcatctgacaaagcaggccgctgcccctcaacttggtgat
gagccagaatatgaggctcatggcaatgatgactcatccatgcacccaggcgattttctt
ccttttgatccttgtacctctgagtttcaagtggatcaaaatcagaaagactttacagaa
agcaattgcttggctaatgcaaatgtcgtgcgttcagaggatgttcctgtagtgcctgaa
aaggagagttctaagagtggaaaaagaaaggttttttcagcatcaaattgttcccggaag
tccaaaaaatcttccttggcagctggccctcaagttgttgatgagctggatgaagctcat
gataatggggggttacctgaacctcctggtagttctgttgatgaagaagataatgattat
gaacctagaggggatgaagagagtgacgatgaaaacaaagtggaaattgcatctcgaaag
aaacgagcttcaaaaaaatcaaaggaaccagtgactgaaaatgaaaaaccagttcgaaag
cgcaacagatccaatgacacttcagaacagtcaatgcaaaaacctcgcaagaagttttct
cattcaactcgtcgaaacaaaagatgcgtgaataaggatttgcttaacatgccagaggat
gagattgatttcaagaggttgcctatcagggacatcattttgtttgcagagtataaggag
cggttagcaacgacaacatcaaaaattcccccaaacaatcaaagcactgacaatccattt
catggagaatattcccataatgaagaggatgggtttgcttcggagcaagacataacccat
ggtgatgaccaaacatatgttagggctcaaccaagttcatctttattcaactaccagtct
ttcatggacagagcacccaattcaagatggtcaaaacaagacacagagttgttttatgag
gggattcaacaatttgggactgatttatcgatgatccaacaactttttcctggtcgaaca
cggcatcaagtcaagttaaaatataaaaaggaggagcgtcagcaccccttaaggctccat
gaagctctgagcagtcgtccaaaagataattcgtattttgaaaagttaattgagcagcta
caagaagttgctggtactcaggaagaacaagagtcttacaaagatgacctagttgatgtg
tcaggcgaggaggatgcagagctaaatgctgaaactagtggtgaagttacaaaacccgag
cagggtgagaatgcaggagttgaagaagaacaggaaaagaatgttgctgaagaccaccat
ggtccactgaaatctggtgttagcgatgaggacgtagatgatatatggggttcatattaa
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integrated database retrieval system
