Populus trichocarpa (black cottonwood): 7477069
Help
Entry
7477069 CDS
T01077
Name
(RefSeq) protein terminal ear1
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_2
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
7477069
NCBI-ProteinID:
XP_024465997
LinkDB
All DBs
Position
10:complement(8280858..8284015)
Genome browser
AA seq
679 aa
AA seq
DB search
MEETGFVPFPGNLDPRAQEFRPRHNNLQDFTTKFPPFGPPPPPPPPQLPQLLHQVYYPYT
PQAVPFCDFVGFTQYHHHVPPMYDTVGTPLPLPPTGAPTRTLVLSSVPSDVSETLIRREL
EVFGEVRGVQMERVGDGIVTVHFYDLRHAERALREIREQHMLHQARLRNLFIQNCESLSL
NIAPPPPARGLIAGCVVWAQFIIPSCKAVPDGQNQGTLVVFNLDPNVSTRCLKETFQAFG
AVKELRETPLKRHQRFVEFYDVRDAAKALGEMNGKEIYGKQVDIEFSRPGGYGKKFFNAS
TTTSKTSFSAPDINSTTNLNRSRISTYASPPSPPLLRRFSSGCSSPNISPRSFLSETHSS
AGKKPSGNPGKGNPNEASNEAASSGCLSLGGGAVGDGIVEKVTDHGHPKKSSKKSQNSQS
FIATKHQQKSAKSWKGTRQAKKFDTRFLISGDDSMVETSGSDSRTTVMIKNIPNKYSQKL
LLNMLDNHCIHCNEQIADGDDQPLSSYDFLYLPIDFNNKCNVGYGFVNMTSPQAAWRLYK
AFHNQHWEVFNSRKICAVTYARVQGLEALKEHFKNSKFPCEMDHYLPVVFSPPRDGRQQT
EPLPIIGLKQLQQPINLGHRPHHEIEDGVDDSSLKTCNKLCGNTDQEGENQHKCCSSICS
SQNGGDVGDDDKDSSGGSN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaccggttttgtcccgtttccgggaaacctagaccctagagctcaagagttc
cgacctcgacataataatcttcaagatttcactacaaaatttcctccttttgggccgccg
cctccgccgccaccaccacaactacctcagctcctgcaccaagtctactacccctacacc
cctcaagcggtgccgttttgcgactttgtaggtttcacccagtatcatcatcatgtgcct
ccgatgtacgataccgtgggtactcctctccctcttcctcctactggtgcgccaacccgg
actctggtactgagttcagtgccgagcgacgtgagcgagacattgattaggagagaattg
gaggtttttggagaagttagaggggtccagatggaaagagtaggtgatgggatcgtgacc
gttcatttctacgatttaaggcatgcagagagagccttgagggagatacgagagcagcac
atgctgcatcaagccaggctaaggaatctctttattcaaaattgtgagagcctgagcttg
aacattgcaccacccccaccggcgcgtggtttgattgcgggttgtgtagtttgggctcag
tttattatcccgtcttgtaaagcggtgcccgacgggcaaaatcaagggacccttgtggtc
ttcaatttggaccccaatgtttctactagatgtctcaaagaaactttccaagcttttggt
gctgttaaggaattgagagagactcctttgaagaggcaccaaaggtttgtggagttctat
gatgtaagagatgcagccaaggcactcggagagatgaatggaaaggaaatttacggaaag
caagttgatattgaattcagtcgtcctggtgggtatggaaagaagtttttcaatgccagc
accaccacttccaaaacctccttctctgctcctgacatcaactccacaacaaaccttaac
cgttccagaatttcaacttacgcctctccaccatcaccaccattgcttcgtagattctcc
tccggctgctcgtctccgaatatctccccccgctcatttctgtctgaaactcactcctca
gctggaaagaaaccgtctggtaatcctggcaagggaaaccctaatgaggcttcaaatgaa
gctgcttcatcggggtgcttgtcattgggtggtggtgcagttggagatggaattgttgag
aaggttactgatcatgggcatcccaagaaaagctcaaaaaagagccagaacagccagtcc
ttcatagctacaaagcatcaacagaagagtgcgaagtcatggaagggaacaaggcaagcg
aagaagtttgatactcgttttctcataagtggtgatgattccatggtggaaaccagtggt
agtgattccagaaccactgtcatgatcaagaacatacccaacaagtatagtcagaagctg
ttgttgaatatgttggacaatcactgcattcactgcaacgagcagattgccgatggggat
gaccagcccttgtcttcttatgactttttataccttcccattgatttcaataacaaatgc
aatgtggggtatgggttcgtgaacatgacgtccccacaggcagcatggaggctctacaag
gccttccataatcaacactgggaggtcttcaactctcgaaaaatctgtgcagtcacttac
gctagagttcagggattggaagcgttgaaggagcactttaagaactcaaagttcccgtgc
gagatggaccactatcttccagttgttttttctccgcctcgagacgggaggcaacagacg
gagcctctccccattattggcctcaagcagctccaacagcccatcaatctaggtcaccgc
ccccaccatgagattgaagatggtgtagatgatagcagcctcaagacttgcaacaaattg
tgtggtaacactgaccaagaaggagaaaaccagcacaagtgctgtagcagcatctgcagc
agccaaaacggcggcgatgttggtgatgatgacaaagacagtagtggcggcagcaactag
DBGET
integrated database retrieval system