Populus trichocarpa (black cottonwood): 7478507
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Entry
7478507 CDS
T01077
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g59040
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR
PPR_1
PPR_long
MRP-S27
RPM2
AEP1
Motif
Other DBs
NCBI-GeneID:
7478507
NCBI-ProteinID:
XP_024449560
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Position
1:22985573..22991803
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AA seq
597 aa
AA seq
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MAPALSLRPCISASSSNWSQPKMHANPFIANIKIHRRLEVVSMGMLSPRKFLQKRRKVEV
FKDASDEADQKNWRRLMKQIEDTGSAVSVLRRERIKKDGLPRDLVLGTLVRFKQLKKWDL
VSEILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALM
EAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENS
PLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFETNYKEVSKI
YDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAI
SGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVT
YGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEME
HHGVPPDQKAQNILLSLAKTQDEQKEASQLVGYPDDCGIQSINGASRFADDDGSDDETDD
EDDYDEADKNDDEDDCDGVDDTAKTVSYSKECEDLIFLDGDNQHNLEALHALTVIDL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccccagccctatctcttaggccctgtatctctgcttcttctagtaattggagccag
ccaaaaatgcatgctaatcctttcatcgcaaacattaaaatccatcgaagattggaagta
gtgtctatgggtatgttgtctcctagaaagtttttgcaaaagagaaggaaagtggaagta
tttaaagatgcgtctgatgaagctgatcagaagaattggaggagactgatgaagcaaatc
gaggatacaggttctgcagtttctgtgcttagaagggagagaatcaagaaagatggtctt
cctagagacctggttttgggcacattagttaggtttaagcagctaaagaaatgggatctt
gttagtgagattttagaatggcttcagtcacagcattggtgggacttcaacgaaatggat
ttccttatgcttatcactgcttatggaaagctaggggatttcaatggggctgaaatggtt
ttgagatctatgaatgggaatggttatgtgccaaatgttgtatcacacactgcacttatg
gaggcatatggaagaggaggccgatataacaatgctgaagccatctttcggaggatgcag
acctcaggccctgagccctctgctttgacgtatcaaataatactaaaaacatttgttgag
ggaaacaaatttaaggaagctgaagaagtttttgagactcttctcaataaagaaaattca
cctttggaaccagatcaaaaaatgttccatatgatgatatatatgcagaaaaaggctggg
aattatgaaaaggctcgtaaagtatttgcgctgatggctgagcgaggagttccacaatcc
actgttacttataacagtctaatgtcatttgaaactaattataaggaggtttcgaagatc
tatgaccagatgcaaagatctggccttcgacctgatgttgtgagctacgcattgctcatt
aaagcttatgggagagctcgaagggaagaagaagctttagctgtttttgaagagatgctg
gatgctggtgtcaggccaagccacaaagcttataacatcttgctcgatgcatttgctatc
tccggaatggtggagcaagctcgggtggtgttcaagagcatgagaagagacagatgcacc
ccagatctttgctcttatacaacgatgttatcagcatatgtgaatgcttctgatatggag
ggtgctgaaaatttcttcaaaagactgagacaagatggtcttaaacccaacgtcgtcact
tatggggcactgatcaaagggcatgccaaggtaaataatcttgaaaagatgatggaaata
tatgaagaaatgcagttaaacagtatcaaagcaaaccagacaattctcactacaataatg
gacgcatatggtaagaacaaggattttggcagtgctgttatttggtacaaggaaatggag
catcatggggtccctcctgaccagaaggcacagaacattcttctatctctggccaagaca
caggatgaacaaaaggaagccagtcaacttgtaggatatccagatgattgtggtatacaa
agcattaacggggcttctaggtttgcagatgacgatggcagtgatgatgaaacagatgat
gaggatgactatgatgaagctgacaagaatgatgacgaggatgattgtgatggagtggat
gatacagcaaagacagtttcatacagtaaagagtgcgaagacttgatatttcttgatggg
gataatcaacataacttggaagcactacatgctcttactgtcattgatttgtaa
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