Populus trichocarpa (black cottonwood): 7478560
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Entry
7478560 CDS
T01077
Name
(RefSeq) chromatin modification-related protein eaf-1 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-DBF
zf-RING_UBOX
zf_UBZ
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
7478560
NCBI-ProteinID:
XP_024458425
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All DBs
Position
1:complement(26365911..26374468)
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AA seq
1327 aa
AA seq
DB search
MGFDNECIPDIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYVVSTTRACPYDG
YLVTEADSKPLIESNKTLAETIGKITVHCLYHRSGCPWQGTLSDCTSHCSGCAFGNSPVV
CNRCGTQIVHRQVQEHAQNCPGVQPQPQPAEGAQDATSTGMPTTGNQGQAAIRTGTSTSQ
AQTSTTSTPAKDTIQQISTTTQAQTSVQADVPTAEQWYQQQPQYQQYYQQYPGYDPYQQH
YQQYYPYQQQAVSQYQQPQVSMHAQAPQPLPQPQPQPQVPINTLPQNLAQVNPQQLTHHT
VQQQSLTQLPANPPAQGYPPPQAQSNTQPHPAQPLPQHVPQYQQPPSQMLHPQPQIQAQV
NSQLHPQKNPVPQSHVQAQSQTPLPVLQPLAPQPNQTVNPNPQPQPQPQPQPQHYPFHAV
TGHHSYLQPQIHQQMPLGAPQHPRGGPQSQSQQPVQMQSQFIQQPPLLPPPQSHAAFQNP
QQPGLLPSPVQVPSIPPAQQQPVHSHADQPGLPVQQRPVMQPIVQPMNQQYVQHQQPFPG
QPWGAVHNQMHHQGLYGQQHPQTQLHPHGPVQSFQQPSHAYPHPQQNVPLPRGAHPHQAQ
SLAVGTGVSPHGVLSVQSYPQSTAVMQARPVQIGANQQSGNILKTNNQVEFSSEQQAWVA
SRPISERQGDIEKGAEGESSAHNTIKKELNELDAGLGASASEMKTIKSESDLKQVDDENK
PTGEAKDIPGAPAAANGEPSIKQVKEDHRDVTDKQKDISNADQKKVELSLSEYMDGKDGL
SLETAPSHLEEQSKKSQKDKTPTSQGFGGFPPNGHMQSQPVSVVDQGKLHPLPIHQGPAA
LQQRPVGPSWLQAPHGPPHHMQLPGHPPSHHGRLPPGHMPSHYGPPQGPYTHAPTSQGER
TSSYVHETSMFGNQRPSYPGGRQGILSNAVGTNGAQDPNSDRFRSFPDEHLNPFPHDPAR
RNAHQGEFEEDLKHFTAPSCLDTKPVPKSGGHFSSSRPLDRGPHGFGVDGAPKHLDKGSH
GLNYDSGLNVEPLGGSAPPRFFPPIHHDRTLHRSEAEGSLGFHDNLAGRTDFARTRPGLL
GPPMPGYDHRDMDNLAPRSPGRDYPGMSMQRFGALPGLDDIDGRAPQRSSDPITSSLHDS
RFPLFPSHLRRGELNGPGNFHMGEHLSGDLMGHDGWPAHLRRGERLGPRNPPSHLRLGER
GGFGSFPGHARMGELAGPGNLYHQQLGEPGFRSSFGGSYAGDLQYSENSRKRKSSMGWCR
ICKVDCETFEGLDLHSQTREHQKMAMDMVVTIKQNVKKHKSAPSDHSSLEDTSKLRNASF
EGRGNKH
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgataacgagtgcatacctgatattcaatctcttgccggagagtatttttgt
ccggtctgtcgtcttcttgtgtacccaaacgaagcattacaatcacaatgtactcacttg
tactgcaaaccgtgtttgacgtatgttgtgagcactacccgagcttgcccctatgacggc
tacttagtgacagaagcagattccaagccgcttattgaatcgaataaaacgcttgctgaa
accattggcaagataacagtccattgtttgtatcataggagtgggtgcccgtggcagggt
actctatccgattgcacatctcattgctcaggatgcgcctttggtaattctcctgtagtt
tgcaacaggtgtggaactcaaattgtgcatagacaagtgcaggaacatgctcaaaactgt
ccaggtgtgcagcctcaaccacaacctgccgagggtgctcaggatgcaacgagcacaggt
atgccaactactggtaatcaaggtcaggctgccattcgaacaggaacatctacttcacag
gctcaaacttctacgacctcaacacctgcaaaagataccatccagcaaatcagcacaact
acccaggcccagacttcagtacaggctgatgtacccactgcagaacagtggtatcaacag
cagccgcaatatcaacaatactaccagcagtatcctggatatgacccataccaacagcat
tatcagcaatactacccgtatcaacagcaagcagtctcacaataccagcaaccacaggtg
agcatgcatgctcaggccccccaacccctgccccagccccaaccccaacctcaggtaccc
attaatactctacctcagaaccttgctcaagtgaatccacagcaactaactcaccataca
gttcagcaacaatctctgacccaactgccggcaaatccaccagcccagggttatccacct
cctcaggctcagtccaatacacagccccaccctgctcagcctcttccacaacatgtgcct
caatatcaacagcctccctcgcagatgctgcatccacagccccaaattcaagcacaggtt
aattctcagcttcaccctcaaaagaatcctgttcctcaatctcatgtacaagctcagtca
caaactccgctgcctgttctccagcccctggctcctcaacccaaccagactgtaaatcct
aatcctcagcctcagcctcagcctcagcctcagcctcaacattatccattccatgcagtg
acaggccatcactcttatctacagccccagattcaccaacaaatgccgctgggagccccc
caacatcctcgaggtggaccgcaatctcagtcacaacagcctgttcaaatgcagagtcag
ttcattcaacaaccacctttattgcctccaccacaatctcatgctgcatttcaaaacccg
caacaaccaggtttgctgccttcacctgttcaagtcccaagtattcctcctgcacaacag
cagccggttcattctcatgcagatcaacctgggcttcctgttcaacaacgccctgtcatg
cagccaattgtgcaaccaatgaatcagcaatatgtacagcaccagcagccttttcctgga
caaccctggggtgcagttcacaatcaaatgcatcatcaaggtctgtatgggcagcagcat
ccacagactcagttacatcctcatggaccggtccagtcattccaacaaccttctcatgcc
tatccacatccacaacaaaatgttccattgccgcgtggtgcacatcctcatcaagcccaa
agccttgcagtagggactggagtttcacctcatggagtgctatcagtgcagtcatatcca
caatctactgctgtcatgcaggcccgaccggttcagattggtgcaaaccagcaatctgga
aatattctaaagacaaacaaccaagttgaattttcttctgaacaacaggcatgggttgct
tcaagaccgatttcagaaagacaaggtgatattgagaaaggtgctgaaggtgaatcatct
gctcataacactattaaaaaggaattaaatgagttggatgctggtcttggagctagtgca
agtgagatgaaaaccataaaatctgaaagtgacttgaagcaagtggatgacgagaataaa
cccacaggtgaagccaaggatattccaggagcgcctgcagcagcaaatggagagccttca
attaagcaggtgaaagaagatcatagagatgttactgataagcagaaagatatttctaat
gctgaccaaaaaaaggtggagctctctttgtcagaatacatggatggtaaggatggactt
tcgctggaaactgccccatcacaccttgaagagcaaagtaagaaatcgcagaaggacaaa
actccgacttctcaaggttttggaggcttccctccaaatgggcacatgcaatcccaacca
gtttcagttgttgaccagggaaagctgcaccctcttccaattcaccaggggcctgctgct
cttcaacaaaggccagttgggccttcgtggcttcaagctcctcatggacctccacatcac
atgcaattgcctggccatcctccatctcatcatgggcgtttgcctcctggacacatgcca
agtcattatggtcctcctcaagggccttatactcatgcacccacatctcaaggtgagcga
acatcttcatatgtccatgaaacttcgatgtttggaaatcagaggcccagctatccaggt
ggtagacaaggcatactttcaaatgcagtgggaacgaatggggcccaagaccccaattca
gataggttcaggtctttcccagatgagcatttgaatccctttccacatgaccctgcacgt
cgcaatgctcatcaaggagagtttgaagaagatctgaagcatttcactgcaccctcctgt
ttggacacgaaaccagttccaaaatctggcggtcacttttcctcatctaggcctcttgat
aggggtcctcatggttttggtgtggatggagcaccaaaacatcttgacaagggatcccat
ggtttgaattatgattcagggttgaacgtggaacctctgggtggctctgctcctccaaga
ttctttcctcccatccatcatgatagaacattgcatcgcagtgaagcagaaggatcatta
ggttttcatgacaatctagccggccgaacagattttgctcgaactcgtcctggtttactt
gggcccccaatgcctggatatgatcaccgtgatatggataatttggctccaagaagtcca
ggtagggattaccctggcatgtctatgcagagattcggtgcccttccaggcctagatgat
attgatggcagagctccgcaacggtctagtgatccaataactagttctcttcatgatagt
aggtttccactttttcctagccatttgcgcaggggtgagcttaatggtcctggtaatttt
cacatgggtgagcatttgagtggtgatctaatgggtcatgatggttggccagcccatttg
cgaaggggtgaacgtttgggtcctcgtaacccgcctagtcatttgcggttgggagagcga
ggtggctttggttctttccctggtcatgcacggatgggagaattggctgggcctgggaac
ttgtatcatcaacaacttggtgagcctggatttagaagcagctttggtggaagctatgca
ggtgatttgcagtattctgaaaactctagaaagaggaaatcaagcatgggatggtgtcgt
atctgtaaagttgactgtgaaacatttgaaggcttggacttgcattcacagactagggag
caccaaaagatggctatggacatggttgtaaccattaagcagaatgtgaagaagcacaaa
tcagctcccagtgatcattcctcacttgaagatacaagcaagctaaggaatgccagtttt
gagggacgggggaataagcattga
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integrated database retrieval system
