Populus trichocarpa (black cottonwood): 7478905
Help
Entry
7478905 CDS
T01077
Name
(RefSeq) calreticulin
KO
K08057
calreticulin
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
pop04145
Phagosome
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7478905
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7478905
04148 Efferocytosis
7478905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7478905
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pop04091
]
7478905
Chaperones and folding catalysts [BR:
pop03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
7478905
Lectins [BR:
pop04091
]
Calnexin / calreticulin
7478905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CDC45
Motif
Other DBs
NCBI-GeneID:
7478905
NCBI-ProteinID:
XP_002318957
UniProt:
A9PEC9
LinkDB
All DBs
Position
13:623190..626820
Genome browser
AA seq
414 aa
AA seq
DB search
MANPKIIPLILFSLFAIASAKVFFEERFEDGWENSWVVSDWKKDENTAGVWNYTSGKWNG
DPNDKGIQTSEDYRFYAISAEFPKFSNKDQTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ
KKFGGDTPYSIMFGPDICGYSTKKVHAILNYNEANHLIKKEVPCETDQLSHVYTLIIRPD
ATYSILIDNVEKQTGSLYSDWDLLPPKTIKDPEAKKPEDWDDKEYIADPEDKKPEGYDDI
LKELPDPEAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKPKKIKNPNYQGKWKAPIIDNPD
FKDDPELYVYPDLRYVGIELWQVKSGTLFDNVLVSDDPEYAKQMAEETWGKQKDAEKAAF
EEVEKKRDEEESKEDPADSDAEEEDEAGDAEGEDSDAETKADTADDEDEVHDEL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccctaaaatcatccctctgattctcttctctctcttcgcgatcgcatctgct
aaagtcttcttcgaagaacgattcgaagatggatgggagaatagctgggttgtatctgat
tggaagaaagatgagaacactgctggggtgtggaactacacttctggaaaatggaatgga
gaccccaatgacaaaggtatccaaacaagtgaagactataggttctatgctatttcagct
gagttccctaaattcagcaacaaggatcagacactagtcttccaattctccgtcaagcat
gagcaaaagcttgactgtggtggtgggtacatgaagttgctcagtggtgaagttgaccag
aagaaatttggtggtgataccccatacagtatcatgtttggaccagatatatgtggatac
agcaccaagaaagtccatgccattcttaactacaatgaagcaaaccacttgatcaagaag
gaagttccttgtgagactgaccagctctctcatgtctacacattgatcatccgtcctgat
gctacatatagtatccttattgacaatgtggagaagcaaaccggcagtttgtactctgac
tgggatcttctcccaccgaagacaatcaaggatcctgaggccaagaaaccagaagattgg
gatgacaaggagtatattgctgatcccgaggacaagaagccagagggttatgatgacatt
cttaaagaacttccagatcctgaagccaaaaagcccgaggactgggatgatgaggaagat
ggtgagtggactgccccaaccattcctaaccctgagtacaagggcccatggaagccaaag
aaaattaagaaccccaactaccagggcaaatggaaggcaccaattattgacaacccagat
ttcaaggatgatccagaactttatgtttaccctgacttgagatatgttggcattgagttg
tggcaggtgaaatctggaaccttgtttgacaatgtcttggtctctgacgaccccgagtac
gcaaagcagatggctgaagaaacatggggaaagcagaaagatgctgagaaggcagcattc
gaagaggtagagaagaaaagagacgaggaggaatccaaggaagatccagctgactccgat
gctgaggaggaggacgaggctggtgatgctgaaggagaggattccgatgccgagaccaaa
gctgacacggctgacgatgaagatgaagtacatgatgagttgtga
DBGET
integrated database retrieval system