Populus trichocarpa (black cottonwood): 7481468
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Entry
7481468 CDS
T01077
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7481468
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Gene cluster
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Motif
Pfam:
NB-ARC
Rx_N
LRR_8
LRR_4
MeaB
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
7481468
NCBI-ProteinID:
XP_024450505
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All DBs
Position
2:20364809..20368062
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AA seq
895 aa
AA seq
DB search
MADGAVSFLLDKLTTILLQKASLLGDARDKIEEIKLELESMKSFLRDAERRKEKSDSVET
WVRQVREVAYEVEDIIDEFMHHKYKKPLENGFKGIVEGVVKFPKNITSRHRISSKLQKVI
AKVHEVSERSKRYGFDQLDEEATRNVAGDRWQHYGESATFVDDDDIVGMEESTEQLLGWL
MEDEPRRTVISIVGMGGLGKTTLVTRVYNNHIIKRGFDCWAWISVSQTCGTGELLRSIIK
ELFGATSVVIPNNVGSMNYRQLVGMLIDYLHQKRYGSRIILTTRNKNVATSVGIGSRVHQ
LAPLQEKDAWALLCKKAFWNDTDHLCPKELKHLAMAILKKCEGLPLAIVAVGGLMCSRSK
TVVEWKKVLESLNWQLSNNPMLEQVKGILLLSFNDLPFYLKYCFLFCCVFRDGYPIRRKK
LIRLWIAEGFIRERKGMTLEEIAEEYLTELVLRSLIQVTETNDAGRVKICRVQDVMRELA
MTISEKENFCTAYDGYPSKLEGKIRRLSVYSTGESIRLGSAMSHHLRSFFVFPTDTCSSF
SLAVVSSKFKFLRVLDLEGVPIETMPGTLVELFNLRYLNLRDTDIRELPKSMERLNKLQT
LDVWNTYIERLPSGISKLSNLRHLFMLHKNGQNSQTTDALISMQAPGGIWNIRSLQTLAC
IEAEKELIQQVGNLTGLKRLEIAKLRAADGPKLCDSIQKLTGLLRLGVMATNTEEELQLE
ALPLTPIFLQKLTLIGQLNRLPPWIGSLENLTHLYLGYSRLQEDILSSIHVLSSLVFLEL
KKAYDGRALHFKEGWFPRLNKLNLVELVQLDSMKLEENSLPSIRELYLIRCQAMKALPQG
IEHLNGLQKLHLEDMHEQLLQRFRSGLIEDQQKVQHIPTIKLVYITEQTRVVETL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtgctgtgagtttcttacttgataaactaactacaatcctactgcaaaaa
gcatcactgctgggagatgctcgtgataaaatagaagaaatcaaacttgagctagagagc
atgaaatcattcttaagagatgcagaaagaagaaaggaaaagagtgattcagtggaaaca
tgggtgaggcaagtaagagaggttgcgtatgaagtcgaggatataatagatgagttcatg
catcacaaatataagaaacctcttgagaatggattcaagggtatcgtcgaaggcgtggtc
aaattccccaagaacataacttcaaggcatcgaatttcttcaaaactacaaaaggtcata
gctaaggttcatgaggtttcagagagaagcaagcgatatggttttgatcagcttgatgag
gaggctacaagaaatgttgctggcgataggtggcaacattatggagaatcagcaacgttt
gtagatgatgatgatatagtgggaatggaagagagcacggagcagctgcttggatggtta
atggaggatgaacctcgccggactgttatttcaattgtgggaatgggtggtcttggtaag
accactctagtcacaagagtctacaacaatcatataatcaagagaggctttgattgttgg
gcatggatatctgtgtctcaaacatgtgggactggcgagctgttgagaagcatcatcaag
gagctatttggcgcgacatcagtggtgataccaaacaacgtgggttcaatgaactacaga
cagcttgtgggtatgcttattgattatttgcaccagaaaagatatggaagcagaattatc
ctcacaactaggaacaagaatgtagctacctctgttggaattggaagccgtgtccatcag
cttgcgcctcttcaagagaaagatgcttgggccctcttgtgcaaaaaggcattttggaat
gacacggatcacctttgtcccaaagagcttaaacatttagctatggccattttgaagaaa
tgtgagggcttgccacttgcaatagtggcagttggaggcctcatgtgttcaagaagcaag
acggtcgtggaatggaagaaggtccttgaaagcctcaattggcaactaagcaacaatccc
atgctggaacaagtgaagggaatattgctgttgagcttcaatgatttaccattctacctc
aagtattgtttcttattctgttgtgttttccgcgatggttacccaattaggaggaagaag
ctaattaggctatggatagcagaagggttcatccgagaaagaaaaggtatgaccttggaa
gagatagcagaggagtacctcacagaacttgtcctccgaagcctgattcaagttacagag
actaatgatgctgggagggtgaagatatgtcgagtacaagatgtcatgcgtgaactagct
atgacgatatctgaaaaggagaatttctgcacagcgtatgatggttacccatcaaagcta
gaaggaaaaatccgcaggttatcagtttatagtactggtgaaagcatccgattgggcagt
gccatgtcacaccatcttcgctctttctttgtgtttccaacagatacgtgctcttcgttc
tctctagctgttgtgtcatcaaaattcaaatttctaagggttcttgatctagagggtgtt
cccattgagaccatgccaggaacactggttgagttgttcaatctaaggtacttgaacttg
agagatacagatataagggagcttcccaaatcgatggaaaggctaaacaagttacaaaca
ttggatgtatggaatacctatatagaaaggctaccaagtggaatatcaaaactatctaat
ttgaggcatctgtttatgctccacaagaacggtcagaactctcaaacaacagacgctctc
atcagtatgcaggctccgggggggatatggaacatccgcagtttgcagactcttgcatgt
attgaagcagagaaggagctaatccagcaggtagggaacttgactggtctcaaacggttg
gagattgcaaaattgagagctgctgatggaccaaagctgtgcgattcaattcaaaagttg
acaggcctcctccgtttaggtgtgatggcaaccaatacagaagaggaacttcaattggaa
gcattacctttgactccaatatttcttcagaaactaaccttgatcggtcaattgaatagg
ttacctccctggattgggtccttggaaaatctaacgcatttgtatttgggttattctcgt
ctccaagaagatatactttcttctatccatgtactttccagtctagtgttccttgagctc
aagaaagcatatgatggcagggccttgcacttcaaggaaggatggttccctagactgaac
aaactgaatcttgtagagcttgtgcaattggatagcatgaaactggaggagaattcgctg
ccaagcatccgggaattgtatctaattcgttgtcaagcgatgaaggcgttgcctcaaggg
attgagcatcttaatggccttcagaagttgcatctggaggatatgcatgagcaattgttg
cagagattccgaagtggcctcattgaagatcaacagaaggtacagcacataccaacaatc
aaactcgtctacataacagaacaaactcgagtagttgaaacactatga
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