Populus trichocarpa (black cottonwood): 7483253
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Entry
7483253 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL12 isoform X2
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ACAS_N
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7483253
NCBI-ProteinID:
XP_024448202
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Position
1:470194..483189
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AA seq
730 aa
AA seq
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MMETKKSITEVGVDDIIKAGLSVEEEAKEFYRILKETIGEAKGLDPREVWRKVVDNRVLK
PWHPHGVHQLVYYSVYSHWDSSTKGPPLYWFPSLHESRRANLGRVMEIHGPKLLGTEYKD
PIKSFSLFQKFSVEHPEAYWSIVLKELSVVFHEPPKCILDTTDKSKPGGTWLPGSVLNIA
ECCLQPASHPSKKEDDVAIVWRDEMDESVLHHLKLKEFREQVMLVANALDTTFTKGDAIA
IDMPMTVNAVIIYLAIVLAGFVVVSIADSFAAKEIATRLRVSNAKGIFTQDFILRGGRKF
PLYSRVVEANSCKAIVIPVIGNDVGLQLRNQDQTWIDFLSSVNHLPRPNYYSPVYQPVDS
LTNILFSSGTTGDPKAIGWTHLSPIRCSHDGWAHVDIQEGDVYCWPTNLGWVMGPILLYS
TFLCGATLALFHGSPLSRGFGKFVQDAGVTVLGTVPSIVKAWKSTNCMEGLDWTKLKSFC
STGEASNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGCPLQPQAFGAFSTASMTTGFV
ILDENGVSYPDDMPCVGEVGLSPLLMGASDRLLNADHDKVYFKGMPMYKGMQLRRHGDII
KRTVGGYFVVQGRADDTMNLGGIKTSSVEIERVCDRAEESIMETAAISVAPVDGGPELLV
IFVVLKKGFDGEPDKLKMKFSKAIQNNLNPLFKVSFVKIVPEFPRTASNKLLRRVLRDQM
KDELSVRSKI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgaagaagagcataactgaagtgggagttgatgatataatcaaggcaggt
ttgtctgtggaagaggaggctaaagaattctacagaatcctcaaagaaacaattggtgaa
gcaaaagggttagacccaagagaggtttggaggaaagtggtggataatagagtgctaaaa
ccatggcatcctcatggagtgcatcaacttgtttattactctgtctactctcattgggat
tcctcaaccaagggccctcctctttattggtttccttctctacacgaatctagacgggcg
aacttgggacgtgtaatggagattcatggtccgaagcttttaggaactgaatacaaggat
cctataaaaagttttagcctctttcagaaattctctgttgaacatcctgaggcttattgg
tcaattgttctgaaggagctttcagttgtatttcatgaaccgccaaagtgcattctcgac
acaactgacaaatcaaaacctggaggaacatggcttccaggttctgttctgaatattgct
gaatgctgcctgcaacctgcaagccatcctagtaaaaaagaagatgatgtggctattgtc
tggagggatgaaatggatgaatctgttttgcaccatttgaaactgaaagaatttcgagaa
caagtaatgttggtggccaatgcactagatacaacatttacgaagggtgatgcaattgct
attgatatgccaatgacagtcaatgcagttattatatacttggccattgtattagcagga
tttgttgttgtatctatagctgacagctttgcagctaaagaaattgctacccgtttacgt
gtctccaatgcaaagggtatcttcactcaggattttattctcagaggaggtcgaaaattt
cctttgtacagtcgtgttgtagaagctaattcttgcaaggctattgtgatccctgtgatt
ggaaatgatgtagggcttcaattaagaaatcaggatcagacatggatagattttttgtcc
agtgtcaatcaccttccgaggccaaattattactctcctgtttatcaaccagtagactct
ctgactaatatacttttctcatccggaaccacaggggatccaaaagctataggatggaca
catctttcaccaattcgatgttctcacgatggatgggctcacgttgacattcaagaaggt
gatgtctactgctggccgacaaatttagggtgggtgatgggaccaattttactttattcc
acctttttatgtggcgcaactcttgccctcttccatgggtctcctcttagccgggggttc
ggaaagttcgttcaggatgcaggagttactgttttaggtacagttccaagcatagtaaaa
gcttggaagagtaccaactgtatggagggcttagattggacaaagttgaaatccttttgt
agtactggtgaggcctcaaatgttgacgatgacctttggctttcttcgagagcttattac
aagcccatcattgaatgttgtggaggcacagagcttgcatcatcttacatccaaggatgt
ccattgcagccacaagcttttggagcatttagcactgcatcgatgacaacaggctttgtc
atccttgatgaaaatggtgtttcttatccagatgacatgccttgtgttggtgaagtgggt
ttatcccctctattaatgggagcaagtgatagattgctcaatgctgatcatgacaaagtt
tacttcaaaggaatgccgatgtataagggaatgcaacttaggagacatggagacatcatt
aagcgaacagttggaggctattttgttgtacaaggccgggcagatgacaccatgaatctt
ggtggaattaagacaagttctgttgaaattgagcgtgtctgtgaccgtgctgaagaaagc
atcatggagactgccgctatcagtgtagcaccagtagatgggggtccagagctattggta
atttttgtggtgctaaagaaaggatttgatggggaaccagacaagttgaagatgaaattc
tcaaaagccatccaaaacaatctcaaccctttgtttaaggtgagctttgttaagattgtt
cctgagtttccccgaactgcttctaacaagttactaaggagagttttgagggaccaaatg
aaggatgagctatcagttcggagtaaaatttag
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