Populus trichocarpa (black cottonwood): 7484089
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Entry
7484089 CDS
T01077
Name
(RefSeq) disease resistance protein RPV1 isoform X1
Organism
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Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_8
LRR_3
LRR_4
ATPase_2
C-JID
AAA_24
AAA
AAA_16
NACHT
AAA_14
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
7484089
NCBI-ProteinID:
XP_002325283
UniProt:
A0A3N7GSR7
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Position
19:complement(5423..57384)
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AA seq
1164 aa
AA seq
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MASTDSESPFSSSSSSSGHRWNYDVFLSFRGEDTRKNFTDHLYTALIQAGIHTFRDDNEL
PRGEEISPQLLKAIEGSRISIVVFSKHYASSRWCLDELVKILECRQNIDQVVLPIFYDTE
PSDVRKQTGSYAKAFDEHEERFKEEMEKVNKWRGALAEAGNLSGWGLHNEANGYEAEFIK
RIVSDVACKLGNKTLHVAKHPVGIYSRVQGIISLLKGAKPDVGIVGIHGIAGIGKTTIAK
AVFNKLYFGFEGSSFLSDVKEISDKPNGLVELQERLLHDILKPRVWKVSNVYEGMNLIKE
RLHRKKILVVFDDVDKREQLEALMGERCWFGAGSIIIVVTKNKHLLTEVGVDGMYHAKEL
DRDQSLELFSLHAFRETHPAKDYEELSGKVVDYCKGLPLALQILGSHLSIRDKAGWEIDI
AHWRNIPHDDIQGKLRVSFDALNVDTSEIFLDIACYFVGGDKEYVADIVGARYDCHPEVA
FRTLIGRSLITIDTWNSLWMHDTLRKMGREIIRQRSRNHPGNCSRIVLPKDAYNVLSKEL
GTDAVEGLALDVQESFSTKSFTKMRRLKLLQIKGANLVGSYSLLPKELIWLCWFGCPLKS
LPSDFHLNDLVILDMQESNVRKLWKGTKILNKLKILNLSYSKYLDETPNFRELSCLERLI
LTGCTSLVKVHQSIGNLKSLVLLNLHYCDSLKTLPESMGNLKSLQTLNVTQCRQLEKLPE
SLGDIESLTELFTKGTAIKQLPTSARYLKKLTKLSFGGYNKVFYSPDLPSKSRFSRFSLW
LSPRNCSSSNAMLPAFFNSFSSLKELNLSYAGLSEATSSIDLGSLSFLEDLDLSGNKFFN
LPSGISLLPKLQCLRVEKCSNLLSIPELPSSVLFLSINDCTSIERVSAPLQHERLPLLNV
KGCRNLIEIQGMECAGNNWSILNLNGCSNLSENYKMSLIQGLCKGKHYDICLAGGEIPEW
FSHRGEGSALSFILPSVSVPVPDGNKLQALLFWVVSASTNEATLATSLPRFDKCVATFKN
KSNGIELFETMAAVTFDRTITKQSWIQRIPLIGLEESLQGVEELEVNVKISVYDVRKLQR
IPLIGSEESLQGVEELELNVKISFYDVRKCWVEKCGVHLIMEKNKADSDQEIDIHAPGSD
DQPLESSLIRELQKWKITSCSKFG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacggactctgagtctccgttctcttcttcgtcttcatcctctggacataga
tggaactatgatgtttttctaagttttagaggagaagatacccgcaagaactttacagat
catctctataccgccttaatccaggccggaattcatacttttagggatgataatgaactt
cctagaggagaagaaatctctccacaacttctcaaggcaatcgaaggatcaaggatttct
atagtggtcttctccaaacactacgcttcctctagatggtgtcttgacgaacttgtaaag
attcttgagtgcaggcaaaacattgaccaggttgttcttcctatattctatgatacggag
ccttcagatgtccgaaaacagaccgggagttatgcaaaagcttttgatgaacatgaagaa
cgcttcaaggaagaaatggagaaggtcaacaagtggagaggagctcttgcagaagcggga
aatctatctggatggggtttacacaatgaggcaaatggatatgaagcggaattcatcaaa
aggattgtcagtgatgtagcttgtaaactgggaaacaaaaccttgcacgtagccaagcac
ccagtaggtatttattccagagttcagggtattatttctttgctaaaaggtgcaaaaccg
gatgttggcatcgtgggaatacatgggatagctggaataggaaagacaacaatagcaaaa
gctgtgtttaacaaactttattttggatttgagggaagcagttttctttcggacgtcaag
gaaatatcagataagccgaatggtctggttgaattacaagagcgccttcttcatgatatt
ctgaaaccaagagtttggaaggtcagtaatgtttatgaaggcatgaatttgatcaaagaa
cgacttcatcgtaagaaaattcttgttgtttttgacgatgtggacaaaagggaacaactg
gaggcattgatgggagagagatgctggtttggtgccggaagtataataattgttgtaact
aagaataagcatctgctaacagaagtgggggtagatggaatgtatcatgctaaagaattg
gatcgagatcagtctcttgagcttttcagtttgcatgcttttagggaaacccatccagca
aaggattatgaggagctttcaggaaaggtagttgactactgcaaaggacttcctttggct
ctacaaattttgggttctcatttatctataagagacaaagctggatgggaaatcgatatt
gcccattggcgaaatattccgcatgatgatattcaaggaaagcttagagtaagttttgat
gcactgaatgtggatacaagtgagatattccttgatattgcgtgctattttgttggtgga
gacaaagaatatgtagcagatatagtaggtgctcgttacgattgccatccagaagtagct
ttcagaactctcattggaaggtctctcataacaatcgacacttggaatagcttatggatg
catgatacattacgaaagatgggaagggagattattcgtcaaaggtcgcgtaatcatcct
ggaaattgcagcagaattgtacttcccaaagacgcatacaatgtactctccaaggaactg
ggaacagatgctgtggagggtctggcactagatgtgcaagaatcttttagcacaaaatcg
tttacaaaaatgagacgtttaaaattactccaaatcaaaggagcaaatcttgtgggaagc
tacagtcttctccccaaagagttgatatggctttgttggtttggatgccctttgaaatct
ttgccgtctgattttcacttaaacgaccttgttatacttgatatgcaagaaagtaacgta
cgaaaactttggaaggggactaagattcttaacaagctgaaaatcctcaatctcagctat
tccaagtaccttgatgaaacgccgaactttcgagaactctcttgtttggagagactaata
cttactggatgcacgagtttggttaaggtacatcaatctattggaaatttgaagagcctt
gttttgttgaacttgcattactgtgacagcctaaagactcttccagaaagcatgggtaac
ttaaaatctcttcaaactctgaacgttactcagtgcagacaacttgagaaattgccagag
agtttgggtgacatagaatccttaacagaattgtttacaaagggtactgcgattaagcaa
cttcctacttcagctagatatttgaagaagctgacaaagttatcatttggtggatacaac
aaagttttctactcacctgatctaccttctaaatctcggttttcaagattttctttgtgg
ctttcaccacgaaactgttctagctccaacgctatgctaccagcttttttcaatagtttc
agctcattgaaagaactaaatctaagttatgctggtttgtctgaagctacaagttccatt
gatcttgggagtttgtcctttcttgaagatttggatttgtctggaaacaaattcttcaat
ctgccttctggcattagcctccttcctaagcttcaatgtttgagggttgagaaatgttcg
aatctgctatcaatcccagagcttccatcaagtgtcctattcttgtctatcaatgactgc
acatccattgaaagagtaagtgcaccacttcagcacgaaagactaccattactgaatgta
aaagggtgccgaaatttaatagagattcagggcatggaatgcgcgggcaataactggtcc
attttgaacttaaatggctgcagcaatttatctgaaaactataagatgagtcttattcag
ggattatgcaaaggtaaacattatgacatttgccttgctggtggtgagataccagaatgg
ttcagccatcgtggagaaggatctgcattatcatttattttaccctcagtgtcagttcca
gttccagatggtaataaactccaagcgctccttttttgggttgtctcggcctccaccaat
gaagccactctagcaacatcacttcctcggtttgataagtgtgttgctactttcaaaaat
aagagtaatggtattgaattgtttgagacgatggcggcagttacgtttgacagaactatc
acgaagcagtcttggatacagcgtataccgttgattgggttagaggaatcgctgcaaggt
gtagaggaattggaagtgaatgtcaaaataagcgtatatgatgttcgaaaattacagcgt
ataccgttgatcgggtcagaggaatcgctgcaaggtgtagaggaattggaactgaatgtc
aaaataagcttctatgatgttcgaaaatgttgggtagaaaaatgcggggtacatttgata
atggaaaagaataaagcagattcagatcaggagattgatattcatgctccaggctctgat
gatcagccgttggaaagtagtttgataagagagttgcaaaaatggaaaatcaccagttgc
agtaaatttggatag
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