Populus trichocarpa (black cottonwood): 7484090
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Entry
7484090 CDS
T01077
Name
(RefSeq) disease resistance protein RPV1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_3
ATPase_2
AAA_24
AAA
NACHT
AAA_16
LRR_4
LRR_8
nSTAND3
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
7484090
NCBI-ProteinID:
XP_002325284
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Position
19:complement(64710..73260)
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AA seq
771 aa
AA seq
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MYHLCKVLQICEKITSKLTSLLSILFNLPFQFAIEIDKTVPAMASTDSESPFSSSSSSSG
HRWNYDVFLSFRGEDTRKNFTDHLYTALGNAGIHTFRDDNELPRGEEISPQLLKAIEGSR
ISIVVFSKHYASSRWCLDELVKIIECRQKIGQVVLPIFYDTEPSDVRKQTGSYAKAFDEH
EERFKEEMEKVNKWRGALAQAGNLSGFGLNNEANGYEAEFIKRIVSDVACKLGNKTLHVA
KHPVGIYSRVQCIISLLKGAKPDVGIVGIHGIAGIGKTTIAKAVFNKLYFGFEGSSFLSD
VKEISDKPNGLVELQERLLHDILKPRVWKVSNVYEGMNLIKERLHRKKILVVFDDVDKRE
QLEALMGERCWFGAGSIIIVVTKNKHLLTEVGVDGMYHAKELDRDQSLELFSLHAFRETH
PAKDYEELSEKVVDYCKGLPLALQILGSHLSIRDKAGWEIDIAHWRNIPHDDIQGKLRVS
FDALNVDTSEIFLDIACYFVGGDKEYVADIVGARYDCHPEVAFRTLIGRSLITIDTWNSL
WMHDTLRKMGREIIRQRSRNHPGNCSRIVLPKDAYNVLSKELGTDAVEGLALDVQESYST
KSFTKMRRLKLLQINRANLVGSYSLLPKELIWLCWSGCPLKSLPSDFHLNDLVILDMQES
NVRKLWKGTKILNKLKILNLSFSKYLAKTPNFRGLSSLERLILTKCPSLVEVHQSIGNLK
SLVLLSLDYCRSLKTLPESMGNLKSLQTLNVTQCIQLEKLPDSLGDIESLT
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatctttgcaaagtacttcaaatttgcgagaaaataacaagcaaattaacgtca
ctcctctccatactcttcaacttacctttccaatttgctatagagattgataaaactgtc
ccagctatggcttccacggactctgagtctccgttctcttcttcgtcttcatcctctgga
catagatggaactatgatgttttcctaagttttagaggagaagatacgcgcaaaaatttt
acagatcatctctataccgccttagggaacgccggaattcatacttttagggatgataat
gaacttcccagaggagaagaaatctctccacagcttctcaaggcaattgaaggatcaagg
atttctatagtggtcttctccaaacactacgcttcctctagatggtgtcttgacgaactg
gtaaagattattgagtgcaggcaaaagattggccaggttgttcttcctatattctatgat
acggagccttcagatgtccgaaaacagaccgggagttatgcaaaagcttttgatgaacat
gaagaacgcttcaaggaagaaatggagaaggtcaacaagtggagaggagctcttgcacag
gctggaaatctatctggatttggtttaaacaatgaggcaaatggatatgaagcggaattc
atcaaaaggattgtcagtgatgtagcttgtaaactgggaaacaaaaccttgcacgtagcc
aagcacccagtaggtatttattccagagttcagtgtattatttctttgctaaaaggtgca
aaacctgatgttggcatcgtgggaatacatgggatagctggaataggcaagacaacaata
gcaaaagctgtgtttaacaaactttattttggatttgagggaagcagttttctttcggac
gtcaaggaaatatcagataagccgaatggtctggttgaattacaagagcgccttcttcat
gatattctgaaaccaagagtttggaaggtcagtaatgtttatgaaggcatgaatttgatc
aaagaacgacttcatcgtaagaaaattcttgttgtttttgacgatgtggacaaaagggaa
caactggaggcattgatgggagagagatgttggtttggtgccggaagtataataattgtt
gtaactaagaataagcatcttctaacagaagtgggggtagatggaatgtatcatgctaaa
gaattggatcgagatcagtctcttgagcttttcagtttgcatgcttttagggaaacccat
ccagcaaaggattacgaggagctttcagaaaaggtagttgactactgcaaaggacttcct
ttggctctacaaattttgggttctcatttatccataagagacaaagctggatgggaaatc
gatattgcccattggcgaaatattccgcatgatgatattcaaggaaagcttagagtaagt
tttgatgcactgaatgtggatacaagcgagatattccttgatattgcgtgctattttgtt
ggtggagacaaagaatatgtagcagatatagtaggtgctcgttacgattgccatccagaa
gtagctttcagaactctcattggaaggtctctcataacaatcgacacttggaatagctta
tggatgcatgatacattacgaaagatgggaagggagattattcgtcaaaggtcgcgtaat
catcctggaaattgcagcagaattgtacttcccaaagacgcatacaatgtactctccaag
gaactgggaacagatgctgtggagggtctggcactagatgtgcaagaatcttatagcaca
aaatcgtttacaaaaatgagacgtttaaaattactccaaatcaatagagcaaatcttgtg
ggaagctacagtcttctccccaaagagttgatatggctttgttggtctggatgccctttg
aaatctttgccgtctgattttcacttaaacgaccttgttatacttgatatgcaagaaagt
aacgtacgaaaactttggaaggggactaagattcttaacaagctgaaaatcctcaatctc
agcttttccaagtaccttgctaaaacgccgaacttccgaggactctctagtttggagaga
ctaatacttacaaaatgcccgagtttggttgaggtacatcaatctattggaaatttgaag
agccttgttttgttgagcttggattactgtcgcagcctaaagactcttccagaaagcatg
ggtaacttaaaatctcttcaaactctgaacgttactcagtgcatacaacttgagaaattg
ccagatagtttgggtgacatagaatccttaacatag
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