Populus trichocarpa (black cottonwood): 7485226
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Entry
7485226 CDS
T01077
Name
(RefSeq) FIP1[V]-like protein isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
DUF5320
Motif
Other DBs
NCBI-GeneID:
7485226
NCBI-ProteinID:
XP_024460554
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Position
6:19435644..19447304
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AA seq
1342 aa
AA seq
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MEDDDEFGDLYTDVLRPFSSSSSSTPQPTQPLSAPSYLHRPIDINDAVKDDDDEILHGNP
PDPTNQNSIQITSFSAPRIRVLGDAESPIKASIGDDTEVSFDIEEVNTGILEDSGPIIPG
LTEDDSRKMEASAEISGGGGDWQDEEESDSEDDLQIVLNDNTHPGGTMGIDREIGDDDDD
DEDGDPLVIVADGDGPNQAIEEQDWGGGEDGVAAAGGGAEGERKEGGEAVGKGNAVVGPK
IGYSNHVYHHHPFHSQFKYVRPGAAPMPAATSVGPGGTPGQVRPPMNMGAMAGRGRGDWR
PVGIKGAPQKNFHPGFGGSAWGAGRGFGSGMEFTLPSHKTIFDFDIDGFEEKPWKYPGVD
ISDYFNFGLNEESWKDYCKQLEQYRLETTMQSKIRVYESGRAEQEYDPDLPPELAAATGF
HATADNSNAGKSDIGQSDLAKGSARMRPQIPTGRAIQVETGYGERIPSIEGRAPRLRDSD
AIIEIVCQGSLEDSPPRDGVQDGAHNDPQKDDFKVSDASEDDMEQTENEYAGGFPQAYNG
RKGGRRTPYMNSAHNMSEGDVLPIHPKAPAPYHQTGSRGHPPSYPGRESGTPHEERRMQG
RSCDSSPHLTPSQNSRDKKFLDDVEEESTESMDDKLSPRISSPITVRDARELSSEEKDDV
EPLQAEESSRLGRDEMTENEETTNDKDGNVHHSTRKQKVSSHVEQPALQQLDDEEDSKAA
RSSENSKARSGSSKDYQKWQDGVEEEVVQDRRSTRSGSIRRHLDENEQNFQRKDRDVRRE
MERNRGVIRGREDSYPHRDLDPSLPHHLHMKHESYDKRKERENPDISWQQRDEDPHSRKH
RTEDRKREHGDEMGSRHRGKIRETERSDKDEHLHSRKQLENGSYRIHHDKDGSSRHRERD
DNLKSRFEMVDDYHSKRRKDEEYVKREYADKEEILHGHRENTSRRRHERDDQQRIRDNLD
GYHSVKHKDEVWLQRERGERQRQREREREELYRVKQSSEENLPKREREEGRASARSGRVV
DDKAWAGHAWGKDEYKVSDKEYQLKDTVRISEHQKRRDRMEDESLSHHRGQDDVYARGNQ
FSNEERRSRQERSSSRVDRTVDTSVSQRVHEKKHKENPRKNKESDGDHGTWGPSKRNQDN
LNGHSDETVLKRSREPGSREAEILMQLNSSKRLKKNASSDDEQQDSRRGRSKLERWTSHK
ERDYNISKASASLKFKETDRNNNGGSLQGSKLSDEPPKKVETVEKQAKIETVEKHCTGEE
KDVADAENKDTDTKPSGDRHLDTVEKLKKRSERFKLPMPSEKDAFSVKKMESEAVPSVKP
ETPADSEIKPERPPRKRRWISN
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgacgaatttggagatctctacactgacgtcttacgtccattctcttca
tcctcatcctctactccgcaaccaacacaacctctctctgcaccgtcttatctccaccgt
ccgatcgatatcaacgacgctgtcaaagacgacgatgacgagatcctccacggcaatcct
cctgatccaaccaatcaaaactctattcaaattacctctttttcagctcctcgaattagg
gttttgggagatgcagaatcgcctattaaagcatccattggcgacgacacagaggtcagt
tttgatatcgaggaggttaatactgggattcttgaagattcgggcccgattatccctgga
ttgacggaagatgattctagaaagatggaagcttctgctgagatcagtggcggtggtggc
gattggcaagacgaggaggagagtgatagcgaggatgatttgcaaatagtgctgaatgat
aacactcatcctggcgggaccatgggaattgatagagagatcggtgatgatgacgatgat
gacgaggatggggacccgcttgtgattgtcgctgatggagatggaccgaatcaagcgata
gaggagcaggattggggtggcggtgaggatggggttgcggctgcaggaggtggggcagaa
ggcgagaggaaagaaggaggagaagcggtggggaaaggaaatgcagtggtcggaccgaag
attgggtatagcaatcatgtttatcatcatcatccgtttcattctcagtttaagtatgta
agacctggtgcagcaccgatgcctgcagctactagtgttggtcccggaggaactccaggt
caagtccgtcctcctatgaacatgggtgctatggctggtcgaggtagaggtgactggcga
ccagtaggaataaaaggtgcccctcaaaagaactttcatccaggatttggggggtctgct
tggggtgcagggaggggttttggcagtggaatggaattcacgcttccttcccacaagacc
atatttgattttgacattgatggctttgaggaaaagccatggaaatatcctggcgtggac
atatcggactacttcaactttggtttgaatgaggagagctggaaagattattgcaaacag
ctggaacaatatcgactggagactacaatgcaaagcaaaattcgtgtttatgaaagtggg
cgggcagagcaggaatacgatcctgatttgccaccagaactagcagcggcaacaggtttc
catgctacagctgacaattcaaatgctggaaagtcagacattggacagagtgatttggct
aaaggatctgctcgtatgcggccacaaataccaactggaagagcaatacaagttgaaact
ggttatggtgaacgcatcccctccattgaaggtcgagctcctcgacttcgtgattctgat
gccatcatagagattgtctgccagggctctctagaagattcccccccaagagatggtgtc
caggatggagcacacaatgatcctcaaaaagatgactttaaagtgagcgatgcatctgaa
gatgacatggaacagacagaaaatgaatatgctggtggttttccacaggcctacaatggt
cgaaagggtgggaggagaacaccttacatgaattctgcccacaacatgtctgagggagat
gttttgcccatccatcccaaagcaccagctccataccaccagactggttctaggggtcac
cctccttcctaccctggtagggaatctggcacccctcatgaggaaaggcggatgcaggga
agatcatgtgatagttctcctcatttaactcctagtcaaaactcacgagacaagaaattt
cttgatgatgtggaggaagaatcaactgaaagtatggacgataaactcagtccacggata
tcatctcctatcacagttcgagatgcaagagagttgagctctgaggaaaaagatgatgtt
gagcctttgcaagctgaggaaagctctagattgggaagggatgaaatgactgagaatgaa
gaaaccactaatgataaggatggaaatgtgcaccattctacaaggaaacaaaaggtaagt
tctcatgtcgaacagcctgcattgcaacagctcgatgatgaggaagactcaaaggctgca
agaagcagtgaaaatagcaaagcaagatcaggcagtagcaaagattatcagaaatggcaa
gatggtgttgaggaggaagttgttcaagatagacgttctacacgctcagggagcatcaga
cggcaccttgatgaaaatgaacagaattttcaaagaaaggatcgtgatgtgagaagagag
atggaaagaaatcgtggtgtgataagagggagggaggattcttatcctcatagagacctg
gatcctagcttgccccatcatttgcatatgaagcatgagagctatgataagcgaaaggag
cgtgaaaatccagatatctcttggcaacaaagagatgaagatccacatagcagaaaacat
agaactgaagacaggaagagggaacacggagatgaaatgggatcaaggcaccggggtaag
attcgggagactgagaggagtgacaaagatgaacatcttcattcaaggaaacagttagag
aatggcagctacaggatccatcatgataaggatggcagttcacggcacagggaaagagat
gacaatttgaagagtaggtttgaaatggtagatgactaccatagcaaaaggaggaaagat
gaagaatatgtgaaaagagaatatgctgataaggaggagatactgcatggccacagagaa
aataccagtcgccgaaggcacgaaagagatgatcagcaaaggattagagacaatcttgat
ggttatcactctgttaagcataaagacgaggtctggctccaaagagagaggggtgagagg
cagaggcagagggagagggagagggaggagttatatagggtaaaacaatccagtgaagaa
aatttaccaaaacgagagagagaagaaggacgagcatctgcaaggagtgggcgtgttgtg
gatgacaaagcatgggctggccatgcttgggggaaagatgaatataaagtttctgataaa
gagtaccaacttaaagatacagttcgaatcagtgaacaccagaaaagaagggaccgaatg
gaggatgaaagtctttcacatcataggggacaagatgatgtttatgcacgtggaaatcag
tttagtaatgaagagagaagatccaggcaggaaaggtcaagctctcgggttgatcgcact
gtagatacttctgttagccaaagggtgcatgagaagaagcataaagaaaacccaaggaag
aataaagaatctgatggagatcatggcacttggggcccttccaaaagaaaccaagacaac
ctgaatggtcacagtgatgaaacggttttaaaacgctctcgtgagccaggaagcagagag
gctgagatcttgatgcaattgaactcttccaaaagactcaagaaaaatgcttcctcggat
gatgaacaacaagattccaggagaggacgctcaaaattggagcgttggacaagccataaa
gagagggattacaatatcagcaaggcatcagcttccttaaagtttaaagagactgatagg
aataacaatggtggatctttacaaggcagtaaactttctgatgaaccccctaagaaagtt
gagactgttgagaagcaggcaaaaatcgagactgttgagaagcattgcacaggtgaagag
aaagatgttgctgatgcagagaataaggatactgatacaaagccatcgggggaccggcac
ttggacacggttgagaagttgaagaagcggagtgagaggttcaagcttccaatgccaagt
gagaaagatgccttctcagtaaaaaagatggagagcgaggcggtgccttctgtcaaacct
gagactcctgcagattcagagattaaaccagagcggcctcctcgaaaacgaaggtggatc
agcaattga
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