Populus trichocarpa (black cottonwood): 7485735
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Entry
7485735 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7485735
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7485735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7485735
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
7485735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RamS
Motif
Other DBs
NCBI-GeneID:
7485735
NCBI-ProteinID:
XP_006369502
UniProt:
B9GET9
LinkDB
All DBs
Position
1:complement(25262044..25267929)
Genome browser
AA seq
1416 aa
AA seq
DB search
MAIEKNNFKVSNRFDAELSPNSRDTSMSSDEDEDDLLHHQRIKSDDDEEEVEDAVDVGVE
EDDDDEFDDADSGAGSDDFDLLELGETGAEFCQFGNLTCSVPFELYDLPGLEDILSVDVW
NDVLTEDDKFSLTKYLPDVDQDTFMRTLKELLEGGNFHFGSPLNKLFQMLKGGLCEPRVA
LYRDGLNSFQQRQHYHILRKHQNSMVSHLCQIRDAWLDCKGYSIDEKLRVWNIMKSHKSL
MYENVEGELESGSSDKGESGDGFWGKRVKDKKSASKFDRNSAYQVGSNLEFSSPVSLEVV
KYGKQNPKSILKSAGSKDLSTRDVLGRIPSDHHGLGMTSRPRRSALMVSRQNKLAGYDSG
DALRLRDQTRTDNDDAEYAMYGMGVQRDRNMTRGGDMVKSRVPKVGKKHEFLRSDGLAAD
SFMDLPFSSNNELLAYGRNKNANQLSEAKVFASNRSNTRTKSESSKKTKYAENFSQFTVP
DQMKYLKGRTLQLPRKGNRVELSDHAEPVWHSKNQGEVFSMDSTFKINDWNMRGKKWRTE
RESPDLNFRAYRASSPQVNDRMVLSEVKAKSSREKIRGNVIQNGGPDKGALKGNRIYVKG
EETETDSSEQFEEEEQEDEEEEEEEEEDSNPLMRSKSAYPIGISEGYRSSFLKSRLDAKK
ASSIKKDTLENELAFDGVTQFSKKVGGFTESGQMPGYSSKAKQKGKMQETRSSSARVLED
SSPIGLAKLKDDNDRNRVHRFGKIGQLRVESGERSRRTSSKAHPSDRKHKGEVSHEFIVD
DEDELLETQLTSDENALGRFRKKGQSMETYVHGQSDRSEASLLACNSVTKKRKAKYKVMD
MAGRDEDSNRQSSSAQQQIDDSISLKKKGKRKLEADDVTPDRETPEAHIPKTGVVDVELE
AKPQKKPYIPITPTVHSGFSFSIIHLLSAVRVAMITPLSEDSLEVGKATAELNRAQEGDT
NGVLSNENVDVNKSHPAVQVKMPSLTVQEIVNRVRSNPMDPCILETQEPLQDLVRGVLKI
FSSKTAPLGIKGWKALVFYDKSTKSWSWIGPISHALTDEDTIVEVTSPEYWGLPHKSCVK
LVDSFANWLKSGQETLQQIGSLPAPPVSLMQCNLDEKERFRDLRAQKSLNTISPSSEEVR
AYFRREEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPPHVTI
LCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEDVSDAQVNQVVSGALDRLHYERDPCVQ
FDGERKLWVYLHRDREEEDFEDDGTSSTKKWKRQKKDPADQSDQGTVTVAFHGTGDQSGF
DLGSDLNAEPLAADDDKRTDLVCSDVRHNAEDNIDTSHGPKQGSTYDGDAMVWDALSLNP
LQENKVICQENSTNEDFDDETFERERPAGLLSTSLL
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagaacaattttaaggtatctaataggtttgacgcggagctttctccc
aatagtagggatactagcatgtccagcgacgaggatgaggatgacctgcttcatcaccag
cggattaagtctgatgatgacgaggaggaggttgaggatgctgttgatgtaggtgttgaa
gaggatgatgatgatgaattcgacgatgctgattcgggggcgggatctgatgattttgac
ttgttagaattaggggaaaccggggcggagttttgccaatttgggaatttaacctgcagt
gttccttttgaattgtatgaccttcctggcttggaggatattttgtctgttgatgtgtgg
aatgatgttttgactgaagatgataaatttagccttactaagtatttacctgatgtggat
caggacacctttatgcgaacccttaaagagcttctcgagggtgggaatttccattttggt
agtcccctcaacaagttgtttcagatgcttaagggagggttgtgtgagccaagggttgcc
ctttatagggatggtttgaattcctttcagcaacggcagcattaccatattttgaggaag
catcagaacagtatggttagtcatttgtgccagataagagatgcttggcttgattgtaaa
gggtatagcatcgatgagaaacttagggtttggaatattatgaagagtcataagagtttg
atgtatgagaatgtggagggagaattggagagtggctcatcggataaaggagaatcaggt
gatgggttttggggaaaaagggttaaagataagaagagtgcatccaaatttgatcgtaat
tcagcataccaggttggttctaatttggaattttcttcaccagtcagtttggaagtggta
aagtatggaaagcaaaatcccaagagtatacttaagtcggccgggtcaaaagatctttca
actagagatgtgctgggtcgaattccttctgatcatcatggtttggggatgacttcaagg
ccacgtcgatcagccttgatggtttctcggcagaataagctagctgggtatgactcagga
gatgcactcaggctaagggatcaaacgagaactgataatgatgatgctgaatatgcaatg
tatggaatgggtgtccaaagagatcgaaatatgacacgtggtggtgatatggtgaaatcc
agggttccaaaagtgggaaagaagcatgagttcttgagaagtgatggattagctgctgac
agtttcatggatttgcctttctcttcaaacaatgaattacttgcctatggtaggaacaag
aatgcaaatcagctgtcagaagctaaagtgttcgcgtcaaatcgtagcaatactcggacc
aagtctgaatcttccaaaaagaccaagtatgctgaaaatttttcgcaattcacagttcct
gatcagatgaagtatttgaaaggccggactctgcagctaccccgtaaaggtaatcgagtt
gaattgtcagatcatgccgaaccagtttggcatagcaagaaccaaggagaagttttctct
atggattctacatttaaaattaatgactggaatatgagaggcaagaaatggaggacagag
agagagtctccggatcttaattttagagcttatagagcatcctcgccccaggtgaatgat
agaatggtgctgtctgaggtgaaagcaaaatcatcacgggagaagatcagagggaatgtt
atacagaatggaggaccagataagggagcattgaaaggtaacagaatttatgtaaaaggt
gaagaaacagaaacggactcttctgaacaatttgaggaggaggagcaggaggacgaggag
gaggaggaggaggaggaggaggatagcaatcctttgatgagaagcaagtcagcttacccc
attggtatctcagaaggttatcgatcatcctttttgaagtctcgcttagatgctaaaaag
gcctcatctattaagaaagatacgctggagaatgaactagctttcgacggtgtcactcag
ttctccaaaaaggtgggtggctttaccgagtctggacaaatgcctggatactcatcaaaa
gctaaacagaagggtaagatgcaagagacgcgtagctctagtgctagagttttggaagac
agctctcccattggcttggctaaactaaaagatgataatgacagaaaccgggtacacaga
tttggcaagattggtcaattgcgtgtggaatctggtgaaaggtcacgcaggacctcgtca
aaagcccacccttctgacagaaagcataaaggtgaagttagccatgaatttattgttgat
gacgaggatgagttacttgaaacacagttaacgtcagatgaaaatgcactgggtagattc
cggaagaaaggacagagcatggaaacatatgttcatggtcaaagtgaccgatctgaggct
tcgttgctagcgtgcaactcggtgacgaagaaacggaaagcaaagtacaaagtgatggac
atggctggaagagatgaagatagtaataggcagtctagtagtgctcagcagcaaattgat
gactccatttcattgaagaaaaaagggaaaaggaaattggaggctgacgatgttactcca
gacagggaaactcctgaggcacacattccaaaaacaggagtggtggatgtggagctggaa
gccaaacctcagaaaaaaccgtatattccgattacaccaacagttcattctggcttctcc
ttttccattatacatctcctctcagcagttcgtgtggcaatgatcactcctctttcagaa
gattccttagaggttggcaaggctacagcagagctgaacagagcgcaagaaggtgacacc
aatggggttctttctaatgagaatgtagatgttaataaatcacaccctgctgtgcaagtg
aaaatgccctctcttactgtacaggagattgttaaccgtgtgagatcaaaccctatggat
ccatgtatactcgagacacaggagccactccaggatttggtcagaggagttcttaagata
ttttcatcgaaaacagcacctttaggaataaagggttggaaagcacttgttttttatgac
aaatctacaaaaagttggtcctggattggcccaatttctcatgctttgactgatgaggac
actatcgttgaagtgacatctcctgaatattggggccttcctcacaaaagttgtgtcaag
ttggtcgactcatttgctaattggctgaaaagcgggcaagagactcttcaacaaattggt
agtcttcccgcaccgcctgtgtcattgatgcaatgtaacctggatgagaaagaaaggttc
agggacttgagagctcagaaaagtctcaacactattagcccgagttctgaagaagttaga
gcttattttcgcagggaagaagtgctgaggtattcaattcctgacagggccttctcatac
acggctgctgatggtaaaaaatctattgttgctcccttgaggaggtgtggtggtaagcca
acttcaaaagctcgagaccatttcatgctgaagcgtgatcgaccacctcatgttacaatt
ctttgccttgtgagagatgcagctgctagattgccaggtagtattggcactagagcagat
gtttgtactttgatacgggactctcaatatattgttgaagacgtgtctgatgcccaagtg
aatcaagttgtcagtggagccttggatcgtttgcattatgagcgcgatccttgtgtgcaa
tttgatggagaaaggaaattgtgggtttacttgcacagagatcgagaagaagaagatttt
gaagatgatggaacttcatctactaagaaatggaaaagacagaaaaaagatcctgctgat
caatctgatcaaggaacagttactgttgcttttcatgggacaggggatcaatccggattt
gatttgggctctgacctgaatgctgagccactagccgctgatgatgataaaagaacagat
cttgtatgtagtgatgtgaggcataacgcagaggataatattgatacctctcatgggccc
aagcaaggcagcacatatgacggtgatgcaatggtttgggatgcccttagcttaaatcct
ttgcaagagaacaaagtgatatgtcaagaaaattccacaaatgaagattttgatgatgaa
acatttgagagagaaaggccggctggacttttaagtacaagcttattatga
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