Populus trichocarpa (black cottonwood): 7487213
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Entry
7487213 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7487213 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
SAP
PPR_long
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
7487213
NCBI-ProteinID:
XP_024447613
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Position
19:3646454..3654214
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AA seq
890 aa
AA seq
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MFLLSLQTPLPFKPRHSLPSKNGVVYASTSATAPKKSRRKKPPKQKNDNGSPLSVVVSAE
EKNLRFAFMEELMHRARNRDSNGVSDVIYDMIAAGLSPGPRSFHGLIVAHTLNGDHEGAM
QSLRRELSAGHRPLHETCIALIRLFGSKGFGTRGLELLAAMEKLNYDIRRAWILLVEELV
KGRFMEDANRVFLKGANGGLRATDELYDLMIEEDCKVGDHSNALDIAYAMEEAGRMATTF
HFNCLLSVQATCGIPEISFATFENMEYGEDYMKPDTESYNWVIQAYTRAESYDRVQDVAE
LLGMMVEDHKRIQPNVKTYALLVECFSKYCVVREAIRHFRALRKFEGGTKALHNEGKFGD
PLSLYLRALCREGRIVDLLEALEAMAEDNQPIPPRAMILSRKYRTLVSSWIEPLQEEAEL
GYEIDYVARYVAEGGLTGERKRWVPRRGKTPLDPDCDGFIYSNPMETSLKQRCLEDWKAH
HRKLLKMLRNEGLAALGDASESDYLRAEERLRKIIRGPDRNVLKPKAASKMIVSELKDEL
EAQGLPIDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEEVDELISRIQLHEG
DTEFWKRRFLGEGFNGNHVKPVDMETSELPDELDEDEDDDDDDVEDVAKEVEDEEADEEG
EVEVEVEQTESQDAERIVKAKEAEAKKPLQMIGVQLLKDSDQTTRMSKKSRRRAARLAVA
DDDDDDWFPEDILEAFKEMRNRKVFDVEDMYLIADAWGWTWEREIKKRPLQRWSQEWEVE
LAIQLMLKVIELGGTPTIGDCAMILRAAIRAPMPSAFLKILQTTHSLGYQFGSSLYDEII
SLCVDLGELDAAIAIVADLETAGIAVPDQTLDRVISAKQAPESAAEETLS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcctctctctccaaactccacttcctttcaaaccccgccactccctcccctct
aaaaacggcgtcgtttatgcctctacctcagcaactgcgccgaaaaaatccaggcgaaag
aaaccaccaaaacaaaaaaacgacaatggctcgccgctctccgtcgtcgtttccgcagag
gagaaaaacctccggttcgcattcatggaagagctcatgcaccgcgcgagaaatcgcgac
tcgaacggcgtgtcggatgtcatttatgatatgatcgctgctggtctctcccctggaccc
cgctcctttcacggtctcattgttgctcatactctcaatggtgatcatgaaggcgcgatg
caatcgttacgaagagaattgagcgcaggacatcggccgctgcacgaaacatgtatagcg
ttaatccggttgtttggatcaaaaggatttggtactagagggttagaattactagcggca
atggagaaattaaattatgatattcggcgcgcttggatacttcttgttgaggagcttgtg
aagggaagatttatggaggacgccaatagagtgtttttgaagggagcaaatggcggattg
agagctacggatgagctttatgatttgatgattgaggaggattgtaaagttggggatcat
tctaatgctttggatattgcttatgcgatggaggaagcggggaggatggcaacgactttt
cattttaattgtcttcttagtgtgcaggctacttgtggaatacctgaaatatcttttgca
acatttgagaacatggagtacggagaagactatatgaaacccgatactgagtcgtataat
tgggtgattcaagcatataccagggctgaatcctatgacagggtgcaagatgttgctgaa
ttgcttggcatgatggttgaagaccacaagcgtatacaacctaatgtgaaaacttatgcg
ctgttagtggagtgcttttccaagtactgtgtagtgcgtgaagctattcggcattttcgt
gcacttagaaagtttgaaggaggaacaaaagctttgcataatgaagggaagtttggggac
ccactttctttgtatcttcgagctttatgtcgagaaggtaggattgttgacttgctggaa
gctttagaagccatggccgaagataaccaacctattccaccaagggccatgatattgagc
agaaaatatcggacattagttagctcatggatcgaacctttgcaagaagaagctgaactt
ggatacgagattgattacgttgctagatacgttgctgagggcgggcttactggtgagcgc
aagcgttgggtgcctcgaagaggtaaaactcctctagatcccgactgtgatggatttata
tactcaaaccctatggaaacctcccttaagcaaaggtgtcttgaggattggaaggctcac
catcgaaagcttttgaagatgttacgaaatgaaggacttgcagctctgggggatgcatct
gaatctgattaccttagagcagaggagagattgaggaaaataatcagaggtccagaccgt
aatgttcttaagcctaaggctgctagcaagatgatagtgtctgagttaaaggatgaacta
gaagcacaaggtctgccaattgatggaactagaaatgttctttatcagcgtgtgcaaaag
gcaaggagaataaaccgttctcgtggccggcctctctgggtcccacctgtggaggaggag
gaggaagaggttgatgaagaggtagatgaactaatttcacgaatccagttgcatgaagga
gatacagaattctggaagcgcagatttcttggagagggcttcaatggcaatcatgttaag
ccagtggacatggagacatctgaacttccagatgagttggacgaggatgaagatgatgat
gatgatgatgtagaagatgttgcaaaagaggttgaagacgaggaggctgatgaagagggg
gaagttgaagtagaagtagaacaaaccgagagccaagatgcagaaaggattgtgaaggcc
aaggaagctgaggctaagaagccccttcaaatgattggagtgcaactgttgaaagactct
gatcaaacaactagaatgtcaaaaaaatcaagaagaagagctgctcgactagctgtggcg
gatgacgacgacgacgactggtttcctgaagatatacttgaggctttcaaggagatgaga
aacagaaaagtttttgatgtggaagacatgtatttaatagctgatgcttggggttggaca
tgggagagagaaataaagaagaggcctctccagaggtggtcacaagaatgggaggtcgag
ttggcaattcaattaatgctgaaggtcatagaattgggtggaacacccactattggagat
tgtgccatgatattgcgggcggctattagggctccaatgccttcagcttttttgaagatc
ttgcagacaacacacagcctaggctatcaattcgggagttctctatacgatgaaataatc
tccttgtgtgttgaccttggggaactggatgcagcgatcgcaatagttgcagatttggag
actgctggaattgcagtcccagaccagaccctcgaccgagtcatttctgctaaacaagcg
cctgagagtgctgcggaggagacattatcgtag
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