Populus trichocarpa (black cottonwood): 7488145
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Entry
7488145 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488145
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7488145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7488145
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
7488145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4195
Motif
Other DBs
NCBI-GeneID:
7488145
NCBI-ProteinID:
XP_006379006
UniProt:
A0A3N7GXV2
LinkDB
All DBs
Position
9:complement(3752682..3758633)
Genome browser
AA seq
1404 aa
AA seq
DB search
MAIEKNNFKVSNKFDAELSPDSRDTAMSSDEDEDEDDLLHQQRIGSDEDEEDDVDVEEGD
EDDEEFNDADSGAGSDDFDLLELGETRAEFCQFGNLTCSVPFELYDLSGLQDILSVDVWN
DVLTEDDKFSLTKYLPDVDQDTFMRTLKELLEGGNFHFGSPINKLFQMLKGGLCEPRVAL
YRDGLYFFQQRQHYHLLRKHQNSMVSHLCQIRDAWHDCKGYSIGEKLRVLNIMKSHKSLM
HENAEGELESGSSDQGEPGDRFWDRTVKDKKSASKFDRTPAYRVGSGLEFSSPVSLEVAK
YGKQNPRGILKSAGSKDPSTRDVPGRFPSVYHGLGMTSSPHGSALTLSRQNKVAGYDSGD
APRQRDQMTTEKDDAEYAMYRLGVQRDRNMVLGGDMVKSRVPRAGKKHDFRTTRLAADSF
MNLPFSSNNDLHAYGRDNNAGPLSEAKVFTSNILNNRTKSESSKKTKYAENSPQFTVPDQ
MKYLKGQTPQLPLKGNRVDLSDHAEPICHSKNQGQVFSMDSTFKSNDWNMRSKKCRTGRE
SPDLNFKAHRALSPQVNDRIALPQVRAKQSREKIRGRVIQNGRPEKRALKANRIYIKGEE
TESDSSEQFDDEDDDGSNPLMKSKSAYPTSIIEGSRSSFLKPSLGAKKASFIKKDVQENE
LAFDGIAHVSKKVSGFTEPGQMPRYLSKAKQMGKMHETHSSSARVLEDSSLTGLGKLKDD
NDRNRIHRSGKIGQLRVESGERLHRSSSKAYPSDRKQKGEVSHDFIVDDEDDLLETQLLS
DENALVRLRKKGRNMETYAHGQSDRPEALLLGCNSGMKKRKAKYDVMDMAGRDEDGNRHS
NSVEQQIDDSISLKKKGKRKLEADDVIPDWETPEAPVTKTGVVDVELEAKPQKKPYTPIT
PTVHIGFSFSIIHLLSAVRLAMITPLSEDSLEVGKPTAELNRAHEGDNNGVLSNENADVN
KSDPAAQVKMPSLTVQEIVNRVRSNPMDPCILETQEPLQDLIRGVLKIFSSKTAPLGIKG
WKALVFYDKSTKTWSWIGPVSHTLTDHDTFIEVTSPEYWGLPHKSCVKLVDSFANWLKSG
QETLQQIGSLPAPPLSLMQCNLDEKERFRDLRAQKSLNTISPSSEEGRAYFRREEVLRYS
IPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPPHVTILCLVRDAAARLP
GSIGTRADVCTLIRDSQYTVEDVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLWVYLH
RDREEEDFEDDGTSSTKKWKRQKKDPADLSDQGTVTVAFHGAGDQSGFDLGSDLNAEPLA
AADDKRTDLVCSDVRQSAEDTVDTTHGLQQGSTYQGESMVWEALSLNPLEENKLICQEDS
TNEDFDDETFERERPDGILSTSLL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagaacaatttcaaggtatctaataagtttgatgcggagctttctcct
gatagtagggatactgccatgtccagtgatgaggacgaggatgaagatgaccttcttcat
cagcagcggattgggtctgatgaggatgaagaggatgacgttgatgttgaagagggtgac
gaagacgacgaagaattcaacgatgctgattctggggcaggatctgatgattttgacttg
ctagaattaggggaaaccagggctgagttttgccaattcgggaatttaacttgcagtgtt
ccctttgaattgtatgacctttctggattgcaggacatattgtctgttgatgtgtggaat
gatgttttaaccgaagatgataaatttagcctcactaagtatttacctgacgttgatcag
gacacctttatgcgaaccctcaaagagcttcttgagggtgggaatttccattttggtagt
cccatcaacaaattgtttcagatgctcaagggggggttgtgtgaaccgagggttgccctt
tacagagatggtttgtatttctttcagcaaaggcagcattaccatcttttgaggaagcat
cagaatagtatggttagtcatttgtgccagataagagatgcttggcatgattgtaaaggg
tatagcattggtgagaagcttagagttttgaatatcatgaagagtcataagagtttgatg
catgagaatgcggagggagaattggagagtggctcatcggaccaaggggaaccaggtgat
aggttttgggacagaacggttaaggataagaagagtgcatccaaatttgatcgtactcca
gcatatcgcgttggttctggtttggaattttcttcaccagtcagtttggaagtggcaaag
tatggaaagcaaaatcccaggggtatactgaagtcagctgggtcaaaagatccttcaact
agagatgtgccgggtcgatttccttctgtttatcatggtttggggatgacttcaagtccg
catggatccgcattgacactttctaggcagaataaggttgctgggtatgactcaggagat
gcacccaggcaaagggatcaaatgacaactgaaaaggatgatgctgaatatgcgatgtac
agattgggtgtccaacgagatcgaaatatggtacttggtggtgatatggtgaagtccagg
gttccaagagcaggaaagaagcatgatttcagaactaccagattagctgctgacagtttc
atgaatttgccattctcttcaaacaatgacttgcatgcctatggtagggacaataatgca
ggtccgctgtcagaagctaaagtgttcacatcaaatattctcaataatcggaccaagtcc
gagtcttccaaaaagaccaagtatgctgaaaattctccgcaattcacagttcctgatcag
atgaaatatttgaaaggccaaactccgcagctaccactgaaaggtaatcgagttgactta
tcagatcatgctgaaccaatttgccatagcaagaatcaaggacaggttttctctatggat
tctacatttaaatctaatgattggaatatgagaagtaagaaatgtaggacggggagagag
tccccggatcttaatttcaaagctcatcgagcattgtcgccgcaggtgaatgatagaatt
gcgctgcctcaggtgagagcaaaacaatcacgggagaagatcagagggcgtgttattcag
aatggaagaccagaaaagagagcattgaaagctaacagaatttatataaaaggtgaagaa
acagaatcagactcatctgaacaatttgatgatgaggatgatgatggtagcaatcctttg
atgaaaagcaagtcagcttaccccaccagtatcatagaaggttctcggtcgtcctttttg
aagcctagcttaggtgctaaaaaggcctcctttattaagaaagatgtgcaggagaatgaa
ctggctttcgatggaatcgcacacgtttccaaaaaggtgagtggctttactgagcctggg
caaatgccaagatacttgtcaaaagctaaacaaatgggtaagatgcatgagacacatagc
tccagtgctagagttttggaagacagctctctcactggcctgggtaaactaaaggatgat
aatgacagaaacagaattcacagatctggcaagattggtcaattacgggtggaatctggt
gaaaggttacacaggtcctcatcgaaagcctacccttctgaccgaaagcagaaaggggaa
gtcagccatgatttcattgttgacgacgaggatgatttacttgaaacacagttactgtca
gatgaaaatgcactggttagattgcgaaagaaaggacggaacatggaaacatatgctcat
ggtcaaagtgaccgacctgaggctttgttgctagggtgcaactcagggatgaagaaacgg
aaagcaaagtacgatgtgatggacatggctggcagagacgaagatggtaataggcattct
aacagtgttgagcagcaaattgacgactccatttcattgaagaaaaaagggaaaaggaaa
ttggaagctgacgatgttattccagactgggaaactcctgaggcacctgttacaaaaaca
ggagtggtggatgtggagctggaagcgaaacctcagaaaaagccatatacaccgattaca
ccaacagttcatattggcttctcattttccattatacatctcctttcagcagttcgtttg
gcaatgatcactcctctttcagaagattccttagaggttggcaaacccacagcagagctg
aacagagcacatgaaggtgacaacaatggggttctttctaatgagaatgcagatgttaat
aaatcagaccctgccgcgcaagtgaaaatgccttctcttactgtacaggagattgttaac
cgtgtgagatcaaaccctatggatccctgcattcttgagacgcaggagccactccaggat
ttgatcagaggagttctcaagatattttcatcaaaaacagcacctctaggaataaagggc
tggaaagcacttgttttttatgacaaatctacaaaaacttggtcctggattggtccagtt
tctcacactttgacagatcatgacacttttattgaagtgacgtctcctgaatattggggc
cttcctcacaaaagttgtgtcaagttggtcgattcttttgctaattggctgaaaagcggg
caagagactcttcaacaaattggaagtcttcctgcaccgcctctgtcattgatgcaatgt
aacctggatgagaaagagaggttcagggacttgagagctcagaaaagtctcaatactatc
agcccgagttctgaagaagggagagcttattttcgtagggaagaagtcctgaggtattcg
attcctgacagggccttctcatacactgctgctgatggtaaaaaatctattgttgctccc
ttgaggaggtgtggtggtaagccaacttcaaaagctcgagaccatttcatgctgaagcgt
gatcgaccacctcatgttacgattctttgtcttgtgagagatgcagctgctagattgcca
ggaagtattggcactagagcagatgtttgtactttgatacgagactctcagtatactgtt
gaagacgtgtctgatgcacaagtgaatcaagttgtcagtggagccctggatcgtttgcat
tatgagcgtgatccttgtgtgcaatttgatggagaaaggaaattgtgggtttacctgcac
agagatcgagaagaagaagattttgaagatgatggtacttcatctactaagaaatggaag
agacagaaaaaagaccctgctgatctatccgatcaaggaacagttaccgttgcttttcat
ggggcaggggatcaatctggatttgatttgggctctgacctcaacgctgagccactagct
gctgctgatgataaaagaacagatcttgtttgtagtgatgtgagacagagtgcggaagat
actgttgacaccactcatgggctccagcaaggcagcacatatcagggtgaatcaatggtt
tgggaggccctgagcttaaatccattggaagagaacaaattgatatgtcaagaagattcc
acaaatgaagattttgatgatgaaacatttgagagagaaaggccagatggaatcttaagt
acaagcttattatga
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