Populus trichocarpa (black cottonwood): 7488981
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Entry
7488981 CDS
T01077
Name
(RefSeq) 4-coumarate--CoA ligase 2
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7488981
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
7488981
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
7488981
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7488981
NCBI-ProteinID:
XP_002324477
UniProt:
B9IM06
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Position
18:11441900..11447286
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AA seq
556 aa
AA seq
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MEANKDQVQEFIFRSKLPDIYIPNHLPLHTYCFEKLSQFKDYPCLINGPTGDIYTYADVE
LTSRKVASGLYKLGVQQGDVILLLLQNSPEFVFALLGASFIGAISSTANPFYTSAEIAKQ
ATASKAKLIITQAAYAEKVQQFAQENDHVKIMTIDSLTENCLHFSELTSSDENEIPAVKI
KPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHERDVILCVLPLFHI
YSLNSVLLCGLRAGSAILLMQKFETVSLMDLVQKYKVTIAPLVPPIFLAIAKSPVVDQYD
LSSIRTVLSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVIAMCLAFAKEPFEIKSG
ACGTVVRNAEMKIVDPETGDSQPRNKAGEICIRGCQIMKGYLNDTEATERTIDKDGWLHT
GDVGYIDEDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVP
VAFVVRSNGSKITEDEIKQYISKQVIFYKRIGRVFFTEAIPKAPSGKILRKDLRARVAAG
DIPHQIPSTTYMQNQH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaataaggatcaagtacaagaattcattttcaggtccaaactccctgatatc
tatatcccaaaccacctacctttacacacttattgcttcgaaaagctttcccaattcaaa
gactacccttgcttgatcaatggccctaccggtgatatctacacttatgcggatgttgag
ctcacatcacgcaaagttgcctctggcctctacaagttaggcgtccaacaaggcgatgtt
atattgctcttgctccaaaactcgccagaatttgtttttgcattgcttggagcgtcgttc
attggcgctattagctcaactgcaaaccctttctatacttcagctgagatcgcaaaacaa
gcaacagcatcaaaggcaaagctgataataacacaagcagcttacgccgagaaagtgcaa
cagtttgctcaagaaaatgatcatgttaagataatgaccatcgattctcttacagaaaac
tgcttgcatttctcagagttgacaagctctgatgagaatgaaatccctgctgtcaagatt
aagcctgatgatgtcgtggcactcccttattcgtcagggactacaggtctccctaaaggt
gtcatgttgactcataaagggcttgttactagtgtggcacaacaagttgatggagagaac
cctaatctctattttcacgagagggatgtgattctttgtgtgctgcctttgttccacatc
tattcactcaattccgtattactttgtgggctaagagctggttcagcaattttgcttatg
caaaaattcgagacggtttcattaatggaccttgtacagaaatacaaggtgacaattgct
ccactcgtgccccctatctttctggcaattgcaaaaagtccagtcgttgatcagtatgat
ctttcttcgatccggacagtactgtctggcgcagcaccgatggggaaggagcttgaggat
acagtcagagctaagctgcctaatgctaaacttggacagggatatggaatgacagaggca
gggcccgtgatagcaatgtgcttagcttttgcaaaggaaccctttgagattaaatctggc
gcatgtgggactgttgttagaaatgcagagatgaagattgtcgacccggaaaccggtgac
tcccaaccgcgaaataaagccggcgagatttgcattaggggttgccaaataatgaaaggt
tatctaaatgatactgaggccactgaaaggacgatagacaaagatggatggttgcacacg
ggagatgttggatacattgatgaagatgaactctttatcgtggatcgtttgaaagaattg
atcaaatacaaaggttttcaagtagcacctgctgagcttgaagcaatgttgattgctcat
cccaacatctctgatgctgctgtagtacccatgaaagatgaagctgccggagaggttccg
gttgcttttgtggtgcgatcaaatggttccaagatcaccgaggatgaaatcaaacaatat
atctcaaaacaggtgatcttttataagagaatcggccgggttttcttcacggaggccatc
cccaaggccccatcgggaaaaatcttgagaaaagacctcagagcaagggttgcagctggt
gatattccacatcagattcctagtacgacatatatgcaaaaccagcattag
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