Populus trichocarpa (black cottonwood): 7489059
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Entry
7489059 CDS
T01077
Name
(RefSeq) trihelix transcription factor GTL1-like isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_4
MADF_DNA_bdg
Myb_DNA-bind_5
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
7489059
NCBI-ProteinID:
XP_024436869
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Position
11:17539686..17544372
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AA seq
808 aa
AA seq
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MQQGGGERGSSQSQYGVPHQQEGDVPITTPTSAALATHMQQQVVEEASPISSRPPATAAT
TSGVMNLDEFIRLSGSGGAEEDIVAGEDADRTGGIASGNRWPRQETHALLQIRSEMDAAF
RDATLKGPLWEDVSRKLAEMGYKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFT
QLEALHNTTGSGGASASVINMSGAAPQQIFTTTTSSLDVAPVSVGIPMPISSSVRIPPPS
SRVLQPASNIGSMFPPDLGATVAAAAAGAGPVGISFSSNGSSSSPSSEDDDDDEEEDEEL
LGGQPSATAAGTSRKRKRASLSSAKGETHRMMEFFEGLMKQLMQKQEAMQQRFLEAIEKR
EQDRMIRDEAWKRQEMARLSREHEIMAQERAISASRDAAIVAFLQKITGQTIHLPTPVSM
APPFSLPPPPPPPEPQPVQVTPLFTVSTQPPPPPQLQPMPQSQVTPQQNIQQPQPLPQQQ
HHHHQQGHRQHQLPISSDIVMAVPEQQIIPQEIGSGGGSGSEPASSRWPKPEVLALIKLR
SGLETKYQEAGPKGPLWEEISTGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKNRSED
AKTCPYFHELDALYRKKILGGSGGGGGGGSTSTSGFDSQSRPQEQQQQESLQLDPMPHPM
QQPPQQTQTTESQNKNGAGGDVQASNIGLPGNLGEGNGGAAKKPEDIVKELKKQQGTQQQ
QQQQQQQQQQQLMVDGYDKIEEGDSENVNEDEYDDEDEGDDDDEEEEEEGLQEERKMAYK
IEFQRQNTSSAANGGGTGGAPSFLAMVQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaggaggtggagaaagagggtcatcacagtcacaatatggagtgccacaccaa
caggaaggtgatgtacctataacaactcctacatctgctgcactagcaacccacatgcag
cagcaagtagtagaagaagcatcgcccattagcagcagacctcctgccacagctgccaca
acaagtggggttatgaatttagatgaatttattagactttcagggagtggtggtgcagaa
gaagatattgttgctggagaagatgcagatcgaacaggaggtattgctagtggcaatagg
tggccaaggcaagaaactcatgcccttttgcaaattaggtctgaaatggatgctgctttt
cgtgatgccaccttaaaaggtcctctatgggaggatgtttcaaggaagctagcagagatg
ggatacaagagaaatgccaagaaatgtaaagaaaagtttgagaacgtgcacaagtattat
aaaagaacaaaggaaggtagagccggtcgtcaagatggcaaaagctacaggttttttacc
cagcttgaagctttgcataatactactggtagtggcggtgcttctgctagtgtcatcaat
atgtctggtgctgctcctcagcagattttcactacaacaacaagcagtctggatgttgct
cctgtttctgttggaattcctatgcctatttcgtcttctgttagaattcctccaccttct
tctcgggtacttcaaccagcttcaaatattggctcaatgttccctcctgatttgggggca
acagtggccgcagctgctgcaggtgctggccctgttggaatcagcttctcgtcgaatggg
tcttcttcttctccaagttctgaagacgatgacgacgacgaggaggaggatgaagagcta
ttaggaggacaaccatcagctacggctgctggtacgagtcgaaaacgtaaaagggcatca
ttatcgtcagctaaaggagaaactcatcggatgatggagttttttgagggactaatgaaa
cagctcatgcagaagcaagaggcgatgcaacagagatttttggaggcgattgagaagagg
gagcaagataggatgataagagatgaagcttggaaaaggcaagagatggctagattgagt
cgtgaacatgagattatggctcaagaacgggctatttctgctagtcgagatgctgctatt
gttgcctttctacagaaaattacaggccaaactattcatttgcctacgcctgtatcaatg
gctcctccattttcactacctccaccaccaccaccaccagaaccgcaaccggttcaagta
acgccattgttcactgtctcaacccaaccaccaccaccaccacaacttcaacccatgcca
cagtcacaagtaacaccacaacaaaatatacaacagccacaaccacttccccaacagcag
caccaccaccaccaacaagggcatcgtcaacaccaactacccatttcttcagatatagta
atggcggtcccggaacaacaaataataccacaggaaattggaagtggtggcggtagtggg
agcgagccagcgtcatcaagatggccaaagccagaagttcttgcacttataaagttgaga
agcgggcttgaaactaaataccaagaagctgggcctaaggggccactttgggaagaaatt
tcaacaggaatgcaaaggatgggctataaaagaagtgccaaaagatgcaaagaaaaatgg
gagaatatcaacaagtacttcaagaaagtaaaagaaagtaacaaaaatcgctcagaagat
gccaagacttgcccttattttcatgagcttgatgccctttataggaaaaagattcttggt
ggaagtggtggtggtggtggtggtggaagcacctctactagtggctttgacagccaaagt
aggccacaagaacagcagcagcaagagagcttacaattggacccaatgccacatccaatg
cagcagccaccgcaacagacacaaaccacagaatcacaaaataaaaatggggctggtggt
gatgttcaagcaagcaatataggtttgcctgggaatctcggagaaggaaatggaggagca
gcaaagaagccagaagacatcgtgaaggagttgaagaaacagcaggggactcaacaacaa
caacagcaacagcaacagcaacagcaacaacagttaatggttgatggctatgataagata
gaggaaggtgacagtgaaaacgtaaatgaagatgaatatgacgacgaagacgagggcgac
gacgatgatgaagaggaggaggaggaagggttacaagaggagaggaaaatggcatacaag
atagagttccaaaggcagaacacaagtagtgctgccaatggaggagggactggcggggca
ccctcctttttggccatggttcaatag
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