Populus trichocarpa (black cottonwood): 7489356
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Entry
7489356 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7489356 isoform X3
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
7489356
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7489356
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
7489356
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
7489356
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7489356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
7489356
NCBI-ProteinID:
XP_002314873
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All DBs
Position
10:14407962..14417410
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AA seq
1002 aa
AA seq
DB search
MASDSDASHRKHRRSSSDDEAEKSSKRHKHRHHHHRHRHCRSKKHGEDTKQGGEDIVPAT
LPPPVPVANSNGADNDDVEEGEILEEEGSGGVDVEANELHEEVPDSQNLGFDKSDIGFVN
NHPVVDQFDNEVCLRRDSRAELRDELVSKIDSEDLANGNLGREYHKDDKKRHVESRSPSK
GSNKQKSNLDITTEGDDSKLRDWRKSSSSESSENRHKRAQSPSRERYHYEIHSRSRSMSR
DLVRERSRSRSLIEYKDLLTRKRHHDRVDYDSDGERMSRNSRVLRHGSRDSVRNVDRESS
VSYNKSFDGEDRYHNKNSQDRERSKEREQRREKEQERCREREVDRVRRRGMEHERSRESF
QRRREMEHERSRKSDHRREKDQYGEVDWERRREKEQGRSRDMVEEIDRKRQQETDLSKHK
NMHGASDRDRDREREREKDRDRYRERDRVRDHDRGNEQERERRNDRDREKSRDKSDSEKL
YNINSNSFGQGRDNLKRDEDEQDDFEKRMALKLAEQEEEDLNRIKEESRKRREAILEKYR
NQHLQQQNESRSEDADKDKEPLEGPGNSAATDNVAPETLDGRTDGADVYVAETLFSVGKS
PSQNGIQVTSERTSGAAGLGEGSPKSERSDEKYCDDIFGETPVGVRKSGKGEGLPIVRSG
LHDNWDDPVGYYSYRFGEVLDGRYEIVAAHGKGVFSTVVRAKDLKAGIDEPEEVAIKIIR
NNETMRKAGDTEVSILKKLAGQDPENKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKK
FGRDIGLKLTAVRAYAKQLFIALKHLRNCGVLHSDIKPDNMLVNEAKNVLKLCDFGNAMF
SGKNEITPYLVSRFYRAPEIILGLTYDHPMDVWSVGCCLYELYTGKVLFPGSTNNDMLRL
HMELKGPFPKKMLKKGAFVDQHFDRDSNFHATEEDPVTKKIMKKIIVNIKAKDIGSIISG
SPGEDPKMLANFKDLLEKLFVLDPEKRMTVNQALAHPFITGK
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgattccgatgcctctcatcgcaagcaccgacgatcttcctccgatgacgag
gcggagaagtcctcgaaacgccacaaacatcgtcaccatcaccaccgacatcgccactgc
cgtagcaagaagcacggagaggatacaaaacaaggcggtgaagacatcgttcctgctact
cttcctcctccggttcctgttgcgaatagtaatggagctgataatgatgacgtggaggaa
ggggagatccttgaggaggaaggttctggtggcgtcgatgtcgaggccaatgaattgcat
gaagaagtaccagattctcaaaatctgggatttgacaagagtgacattggttttgtgaat
aatcatccagttgttgatcagtttgacaatgaggtctgccttcgaagagattctagggct
gagcttcgagatgagctagtttctaaaattgactcagaggatcttgccaatggtaattta
ggtcgtgaataccataaagatgataagaagaggcatgtggaatctaggtccccttcaaag
ggaagtaacaagcaaaaaagtaacctggatattacaactgagggtgatgatagcaaatta
agggattggagaaagtcatcatcttctgaaagcagtgagaataggcataagagggcacaa
tcaccttcgcgtgaaaggtaccattatgagattcattctaggagtagatcaatgtcacga
gatctagttagggagagatcgcgttctcgtagccttattgaatacaaggatcttttgaca
agaaaaagacaccatgacagggttgattatgactctgatggtgaaagaatgtctcgaaac
agcagggttctgcgacatggcagtagagattcagtgagaaatgtggatagggaaagcagt
gttagttacaacaagtcttttgatggagaggatcggtatcacaacaagaattcacaggat
agagagaggagcaaggagagggaacaacgaagagagaaggaacaagagagatgcagggag
agggaggtggatcgggttaggagaagggggatggaacatgagaggagcagggaaagcttc
cagagaagaagggagatggaacatgagaggagtaggaaaagcgaccatagaagggagaag
gatcaatatggggaggtagactgggaaaggaggagggagaaagaacaggggaggagtagg
gacatggtggaggagatagatagaaaaagacagcaggaaacagatttgagcaaacacaaa
aatatgcatggggctagtgacagagatagagacagggagagagaaagggagaaggatagg
gataggtacagggaaagggatagagttagggaccatgatcgtgggaacgaacaggaaagg
gagaggcgaaatgacagggatagggagaaatctagggataagagtgattcagaaaaactc
tataatatcaacagcaattcttttggacagggaagagacaatctaaagagagatgaagat
gaacaggatgattttgaaaaaaggatggcattaaaattagctgaacaggaagaggaagat
ctcaatagaataaaggaggagagtagaaagcgaagggaagccattcttgaaaaatataga
aatcagcatttacagcagcagaatgagtctcgatcagaagatgcagacaaagataaggag
cctttagaaggtcctggtaactcagcagcaaccgacaatgttgctccagaaactctcgat
ggtaggacagatggtgctgacgtttatgttgctgagacattattttctgttgggaaatca
ccttcacaaaatggaatacaagttacttctgagaggacttcaggtgctgcagggcttgga
gaaggttctccgaagagtgagagatcagatgaaaaatattgtgatgatatttttggagag
acgcctgttggagttcgtaaatcaggtaaaggagaaggtttgccaattgtgaggagtggt
ctccatgacaattgggatgatcctgtagggtattatagctaccgatttggagaagtactt
gatggtcgatatgaaattgttgctgctcatggaaaaggtgtcttttctacagtagttcgt
gcgaaggatctgaaggctggcattgatgaacctgaagaagtggctataaaaattatacgt
aacaatgaaacaatgcgcaaggctggggatacagaggtttcaatattgaagaaattagca
ggtcaagatccagagaacaagcgtcattgcgttcgttttctttcaagtttcaagtataga
aatcatctttgtttagtttttgaatctcttcacatgaacctgcgtgaggtcttaaaaaag
tttggtcgagatattggccttaaactaactgctgttagagcatatgcaaagcagcttttt
attgctctgaagcatctaagaaactgtggtgttcttcacagtgatataaagcctgataat
atgctggtaaatgaggcaaaaaatgtgctgaagctttgtgattttggtaatgcgatgttt
tctggtaaaaatgaaattacaccataccttgtaagccggttttatcgtgctcctgaaata
attcttggtttgacgtatgatcatccaatggatgtgtggtctgttggttgctgcttgtat
gagctttatactggaaaagttctatttcctggttctacaaacaatgacatgctacgactc
cacatggaattgaagggccctttcccaaagaagatgcttaagaagggtgcatttgttgac
caacattttgaccgtgattcgaattttcatgctacagaggaagatcctgtcactaaaaag
attatgaaaaagattattgtgaacataaaggcaaaagatattggatctattatttcgggt
tctcctggtgaggatccaaagatgttagcaaactttaaagatcttctagaaaaacttttt
gtgttggatcctgagaagaggatgacagttaatcaagcactagctcacccattcatcacg
ggcaagtga
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