Populus trichocarpa (black cottonwood): 7489375
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Entry
7489375 CDS
T01077
Name
(RefSeq) protein CHUP1, chloroplastic
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
M_domain
Motif
Other DBs
NCBI-GeneID:
7489375
NCBI-ProteinID:
XP_024466779
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Position
10:complement(14718535..14725929)
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AA seq
980 aa
AA seq
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MIVRLGFLVAASIAAFAAKQLHVKTAKSTDSSAKRSENGEASIEQHQIKGDDREQFTYFD
DSIKEKDVEEEEEEEEVKLINSIFNHAQGTPPGMEDEDILPEFEDLLSGEIDYPLPGEKF
DQAEKDKIYETEMANNASELECLRNLVRELEEREVKLEGELLEYYGLKEQESDVVELQRQ
LKIKTVEIDMLNITINSLQAERKKLQEEISHGASSKKELELARNKIKEFQRQIQLDANQT
KGQLLLLKQQVSGLQAKEQEAVKKDAEVEKRLKAVKELEVEVVELKRKNKELQHEKRELI
IKLGAAEAKLTSLSNLSETEMVAKVREEVNNLKHANEDLLKQVEGLQMNRFSEVEELVYL
RWVNACLRYELRNYQTPSGKVSARDLNKSLSPKSQERAKQLLLEYAGSERGQGDTDMESN
YSHPSSPGSEDFDNTSIDSSSSRYSFSKKPNLIQKLKKWGRSKDDSSAFSSPSRSFSGVS
PSRSSMSHRPRGPLESLMIRNASDTVAITSFGKMDQDAPDSPGDSLNSVASSFQVMSKSV
EGVLDEKYPAYKDRHKLALEREKHIKEKAEKARAVKFSDSSNFQFGTKGEKVIPITLPAK
LSQIKEKPVASGESSEQSSDGKDVDSQTVSKMKLAHTEKRAPRVPRPPPKSSAGAPVATN
ANPSGGVPPPPPGAPPPPPPPPGGPPRPPPPPGSLPRGAGSGDKVHRAPELVEFYQSLMK
REAKKDTSSLISSTSNVSHARSNMIGEIENRSSFLLAVKADVETQGDFVQSLATEVRAAS
FSTIDDLVAFVNWLDEELSFLVDERAVLKHFDWPESKADALREAAFEYQDLMKLERQVTS
FVDDPNLPCEAALKKMYKLLEKVENSVYALLRTRDMAVSRYREFGIPTNWLLDSGVVGKI
KLSSVQLARKYMKRVASELDTMSGPEKEPNREFLVLQGVRFAFRVHQFAGGFDAESMKAF
EELRSRVRSQMGEENKMEGS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcaggttaggcttcctggttgctgcttcaattgcagcctttgcagctaaacag
cttcatgtaaaaactgcaaagtcaacagactcttcagccaagcgttcagaaaatggtgaa
gcaagcattgagcaacatcaaatcaaaggagatgacagagaacagtttacatattttgat
gatagcattaaagagaaggatgtggaggaagaagaagaggaagaagaggtcaaattgatt
aatagcatatttaaccatgctcaaggtactccacctggtatggaagatgaagatattcta
cctgaattcgaagatcttctgtctggggaaatcgattatccattacctggggaaaagttt
gaccaagcagagaaggacaaaatttatgaaactgagatggcaaacaatgcaagtgagctg
gaatgtttgcgcaacctagtaagagaattggaggagagagaggtaaagcttgaaggtgaa
ttgctcgagtactatgggttgaaggaacaggaatcagacgtcgttgaattgcaaaggcag
ctcaaaattaagaccgttgagattgacatgctaaatattaccatcaattccctgcaagct
gagaggaagaagcttcaagaagagatttcgcatggagcttcttccaagaaggaattggaa
ttggcaaggaacaagataaaggagtttcagaggcaaattcagcttgatgctaaccagacg
aagggccagttgttattgctcaaacaacaagtttctggtcttcaggcaaaagagcaagaa
gctgtgaaaaaggatgcagaggttgaaaagaggctgaaggctgtgaaggagttggaggta
gaagttgtggaacttaagaggaagaacaaagagcttcaacatgaaaagagagagttgatt
attaagctgggtgctgctgaagctaaattaacatccctctccaatttgtcagagacagaa
atggttgccaaggtaagagaggaggtcaataatttaaagcacgcaaatgaagacctgtta
aaacaagtggaaggacttcaaatgaacaggtttagtgaagttgaagagctagtgtacctt
cgttgggtcaatgcatgcttgaggtatgagctccggaactaccaaacaccttcaggaaaa
gtttcagctcgtgatctcaataaaagtctgagccccaagtcccaagagagggctaaacaa
ctactgttagaatatgccggatcagaacgaggacaaggagacacagatatggaaagcaac
tattctcacccatcttctcctggaagtgaggactttgacaatacttccattgacagttct
tctagcagatacagtttcagtaagaaacctaatttaattcaaaaactgaagaaatggggc
agaagcaaagatgattcaagtgccttttcttcaccgtccagatccttctcaggagtatct
ccaagcaggtctagcatgagccaccgtccaaggggtccgttggaatccttgatgataagg
aatgcaagtgatactgtagccataacttcatttggaaagatggatcaggatgctcctgac
tctcctggtgactcactaaattctgttgcttcatctttccaagtaatgtctaaatcggtg
gaaggagttttagatgagaagtatcctgcctataaagacagacacaagttggccttagaa
agggagaagcatattaaggaaaaagcagaaaaagcaagagcagtgaagtttagtgacagt
tcaaattttcagtttggaacaaagggggagaaagttatacccataactttgccagctaaa
ctttcccaaataaaagagaaaccagttgcctctggtgagtcaagtgaacaatctagtgat
ggtaaggatgttgattcgcagacagtaagcaagatgaaacttgcccacaccgagaagagg
gctcctagggtgccgcggcctcctcctaaatcatctgctggtgctccagttgctacaaat
gccaatccttcaggtggagtgccacctccaccaccaggtgcaccgccaccaccacctcct
ccacctggtggaccacctcgtccacctcctccacctggaagcttgccaagaggagcagga
agtggtgataaagttcaccgggctccggaactagtagaattttatcagagtttgatgaaa
cgcgaggcaaagaaggatacatcatctttgatttcttcaacatctaatgtatcacatgct
cgcagcaacatgataggggaaattgagaacagatcgtctttcctgttggctgtgaaagca
gatgtagaaactcaaggtgatttcgtccagtcattggcaactgaagttcgagcagcttcc
ttctccaccatagatgacttggtggcctttgtaaactggctcgatgaggaattatctttc
ttggttgatgaacgagcagttctcaagcactttgattggcctgaaagtaaagctgatgca
ttgagagaagcagcttttgagtaccaggatctcatgaaattggagaggcaagtaacctct
tttgttgatgatcccaacctcccatgtgaagctgctttaaaaaagatgtacaaattgctc
gaaaaagtggaaaacagcgtatatgcactattgcgtacaagagacatggctgtttcccga
tacagagagtttgggatcccaactaattggttattagattcaggagttgttggcaagatc
aagctctcatccgtgcagttggcaagaaagtacatgaagcgtgttgcatcagaactagat
acaatgagtggacctgagaaagaaccaaacagagagtttttggtactgcaaggtgttcgt
ttcgctttccgtgttcatcagtttgctggaggctttgatgcagagagcatgaaggctttt
gaggaactgaggagccgtgtacgttcacaaatgggagaagagaataagatggaagggtca
taa
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