Populus trichocarpa (black cottonwood): 7491309
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Entry
7491309 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7491309
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
SH3_12
AAA_5
FHA
AAA_16
AAA_22
AAA_14
TIP49
IstB_IS21
AAA_25
AAA_18
Mg_chelatase
nSTAND3
Yop-YscD_cpl
AAA_33
AAA_28
RNA_helicase
AAA_2
AAA_7
AAA_3
DUF815
AAA_17
Sigma54_activat
PhoH
AAA_24
TsaE
Motif
Other DBs
NCBI-GeneID:
7491309
NCBI-ProteinID:
XP_024440508
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Position
14:complement(8767536..8780680)
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AA seq
1226 aa
AA seq
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MVETRRSSSSSKRSLPPSSPPPPSSKRCKAAAAAAALEVSSSTSDTPPPALPLESTSPEK
ESGSPPELDPPEEEKSADVQAEDSMSLAGEKSKAAVLLNKSKKRVPKSVKSSAKAAWGQL
LSQCSQNPHKLMNSTLFSVGQSRQCNLWLNDPSISTVLCKLKHIERGGASVVLLEITGGK
GAVQVNGKLYQKNESLVLNGGDEVIFTTSGKHAYIFQQLTSNNLGTPGMPSVSILEAQSA
PIKGIHIEARPRDPSDYAGASILASLSHLLPPAAKTGEDTQQNTDFSILPSGCEASEDRI
PDVEMKDGTCNNDTADVFPREKAAVPSSNAASENANVDSMGSGACTDAVIGRIPNSTYEL
KPLLRMLAGSSSELDKIFDERERREILKDLDTPPVLMSTRRQLFKDSLQKGILNPEEIEV
SFDSFPYYLSDTTKKVLISAAFIHLKCGNKVAKFACDLPTVSPRMLLSGPAGSEIYQETL
TKALAKDVGARLLIVDSLQLPGGSIPKEADSSRESSKSERVSVFAKRAVQAALQSKKPTS
SVEADITGCSTFSSHARPKQETSTASSKNYTFKTGDRVKFVGASLASAISSLQPPLKGPT
IGLRGKVVLAFEGNDSSKIGVRFDRSIPEGNDLGGRCEEDHGFYCTANSLRLDISGGEDV
DRLAINELFEVALNESKNGPLILFVKDLEKSVVGNQDAYSSLKSKLESLPEKVVVVGCHT
QIDNRKEKSHAGGLLFTKFGGNHTALLDLAFPDSFGRLSDRSKETPKAMKQLSRLFPNKV
TVQLPQDEALLVDWKQQLERDIETLKVQANIASVRSVLSRVGLCCPDLETVCVKDQALAT
DSVEKMVGWALSHHFMQCSEASVKDSKLLISSESVMYGLSILQGIQNENKSLKNSLKDVV
TENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCK
GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPS
VVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA
VIRRLPRRLMVNLPDAPNREKIVRVILAKEDLAPDVDLEAVANMTDGYSGSDLKNLCVTA
AHCPIREILEKEKKERTLALAENSPLPILYSSADIRPLKMEDFRYAHEQVCASVSSESTN
MNELLQWNDLYGEGGSRKKKSLSYFM
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaaccagacgcagctcctcctcctccaaacgctcccttcctccctcttctcct
cctcctccctcttccaaaagatgcaaagctgctgcggctgctgctgcattagaggtgtca
tcatcgacaagcgatacaccgcccccggcgcttcccttggaaagtacaagtccggaaaag
gaatccgggtcaccacctgaattagatccgcccgaggaggagaaatccgctgatgtccaa
gctgaggactcgatgtctctagctggagagaaatccaaggctgcggtactgctgaataag
tcaaagaaacgagtaccaaaatcagtaaaatctagtgccaaagctgcatggggccaattg
ttgtcgcaatgttcacagaatcctcacaagctgatgaatagcactcttttctctgttggt
caaagtcgtcaatgcaatttatggcttaacgatccatccatcagtactgttttatgcaaa
ctgaagcacatagagcgtggaggtgcatctgttgtcttattggaaatcactggggggaaa
ggagcagtccaagtaaatggcaaactttatcagaagaatgaaagtttagtattaaacgga
ggcgatgaagtgattttcactacctctggaaaacatgcatatatttttcagcagctaaca
agcaataacttaggcactccaggtatgccttctgtgagcatcttagaagcccagagtgct
cctataaaagggattcatattgaggcaaggcctagagatccctcagattatgcaggcgct
tcaatattggcttctttgtcacatcttcttccacctgctgccaaaactggtgaggatacg
cagcaaaatacagacttctccatcttgccctctggttgtgaagcatctgaagatcgtatt
ccagatgttgaaatgaaggacggcacatgcaataatgatactgctgatgtcttccctagg
gagaaagctgctgttccttcttctaacgctgccagtgaaaatgctaatgttgatagcatg
ggatcgggtgcttgtacggatgcggttattggaaggattccaaattcaacttatgaatta
aagccactgttgcggatgcttgcaggttcatcttctgaacttgataaaatatttgatgag
agggaaaggagagaaatcctcaaggatcttgatactccaccagttctgatgtccactaga
cggcaattgttcaaggatagtttacaaaaaggaattctaaatcctgaagagattgaagtt
tcatttgacagtttcccatattatctaagtgatacaactaagaaagttttgataagtgct
gcattcatccatttgaagtgcggtaacaaagttgcaaagtttgcttgcgatctccctact
gtgtccccacgcatgttactatctggtcctgcaggttcagaaatatatcaggagactctg
acaaaggcacttgccaaagatgttggtgctagactactaattgtggattcacttcaactg
cctggtggatcaatacccaaagaagctgattcttctagagaaagttcaaaatctgaaaga
gtctctgtgtttgccaaaagagccgtgcaggcggcattacaatctaagaaacctacttct
agtgttgaggccgacataactggttgctccacattcagctctcatgctcggccaaagcag
gaaacttctaccgcatcatccaaaaactacacttttaaaacaggtgacagagtgaagttt
gtgggcgcctctttagcatctgcaatctcttctttgcagcctcctttgaagggaccgaca
attggtttacgaggcaaggtggtccttgcttttgaaggaaatgactcctctaaaattgga
gttagatttgatagatccatcccagaaggcaatgatctgggtggtcgttgtgaagaggat
catggtttctattgtactgcgaattcacttcgtttggatatttctggaggagaagatgtt
gacaggcttgctattaatgagctctttgaggttgctttaaatgaaagtaaaaatggcccc
ctgatcttgtttgtgaaagacttagaaaagtcagtggtgggaaatcaagatgcatactct
tccttaaagagtaagcttgaaagtttaccagagaaagttgtcgtggttggctgccatacc
cagattgacaatcgtaaggagaagtcccatgctggtggtcttctatttacaaagtttgga
ggcaaccacactgcattactagatcttgctttcccggatagctttggtagactgagtgat
aggagcaaagaaacacccaaggcaatgaagcagctctcacggcttttcccaaacaaagtg
acagtacagttgcctcaggatgaagctttgcttgtggactggaaacagcagctggaacgt
gatattgaaactctgaaagtgcaggccaacattgctagcgttcgttcagttcttagccga
gttggtttgtgttgccctgaccttgaaaccgtatgtgttaaagatcaggcccttgcgact
gatagtgtggagaaaatggtgggatgggctttgagtcaccacttcatgcaatgttctgaa
gcctccgtcaaagattccaaacttcttatatcttctgaaagtgtcatgtatggattaagc
attcttcagggcatacaaaatgaaaacaagagcttgaagaattcactaaaggatgtggtc
actgagaatgaatttgagaagaaacttctagcagatgttattcctcctagtgacattgga
gttacctttgacgacattggagccttagaaaatgtgaaggataccttgaaggaactggtt
atgcttcctctgcaaagacctgaattgttttgcaaaggacagctgactaagccttgtaag
ggaatattgctttttgggcctcctggtactgggaaaacaatgctcgcaaaggctgttgca
actgaggctggtgcaaactttataaatatatctatgtcgagcattacttcgaagtggttt
ggagaaggcgaaaagtatgtcaaggcagtgttctctttagctagtaaaatttctcccagt
gttgtttttgttgatgaggtggatagcatgttgggaagacgtgaaaatccaggggaacat
gaggctatgcgtaagatgaagaatgagttcatggtgaattgggatggtctgcgtacaaaa
gacaaagaacgagtgttggtacttgctgccacaaacaggccctttgaccttgatgaggct
gttattaggaggcttccccggagattaatggttaacctgccggatgcaccgaatagagaa
aaaattgtgagggttatcttggccaaagaggatttggcacctgatgttgatttagaagct
gttgcaaatatgaccgatggctattctggaagcgatctaaagaatctatgtgttactgct
gctcattgtcctataagagaaatattagagaaggaaaagaaggaaagaactctggcattg
gctgagaatagtcctttacccatattgtacagcagtgctgacatccgccctctcaagatg
gaggattttagatatgcacatgaacaggtgtgcgcaagtgtgtcatcagagtccacaaac
atgaacgaacttctccaatggaatgatctttatggagaaggtggatctagaaagaagaaa
tcgctcagctatttcatgtag
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