Populus trichocarpa (black cottonwood): 7491889
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Entry
7491889 CDS
T01077
Name
(RefSeq) 4-coumarate--CoA ligase-like 6
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7491889
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
7491889
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
7491889
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7491889
NCBI-ProteinID:
XP_024453012
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Position
3:complement(12492690..12496386)
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AA seq
554 aa
AA seq
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MEKLTATASKTTLPEWYSPETGIYSSKHPPIPLPADPFLDVVSFIFSHHNHNGLTALIDS
SSGFSISYSKILPLVKSVASGLSNMGIKQGDVVLLLLPNSIHFPIVFLGVLYLGGIVSTM
NPLSSELEVKQRIVDCNACIAFVELEKVCKFQPLGIPVIGVPENVNFDEKSNDFEAFYML
VYSKGDVGVKPVIRQQDTAAIMYSSGTTAASKGVVLTHRNFISMVELFVKFEASQYEYSS
TDNVYLAVLPMFHIYGLSLFVVGLLSLGSSIVVMRKFDVSEMVKVIDRYGVTHFPVVPPI
LTALTRTAKGVCGNSLKCLKLVSCGAAPLFGKTIQDFVEVLPHVDFIQGYGLTESTAVGT
RGLNTEKFQKYSSIGLLAPNIEAKVVDWITGALLPPGGSGELWIRGPGVMKEYLNGGEAT
ALTIDKDGWLHTGDVVYADHDGYLYVVDRLKEIIKYKGFQIAPADLEAVLISHCEILDAA
VIPVVDKECGEIPVAFVVKRQGSMLTQEAIINYVAEQVAPYKKVRKVIFTQSIPKSAAGK
ILRRELKCSLTSKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactcactgccaccgcctcaaaaacaacactcccagagtggtactcaccagaa
acaggaatttatagcagcaaacaccctcctatacccttacctgcagacccatttcttgat
gttgtttctttcattttttcacaccataaccacaatggccttacggctcttattgattcc
tcttctgggttttcaatctcttactcaaagattctaccattggtgaaatccgttgcctct
ggtcttagtaacatgggcattaaacaaggtgatgttgttttgcttttgttgccgaattcc
attcactttcccattgttttcctcggcgtgttgtatcttggtggcattgtcagtaccatg
aatccacttagtagtgaactagaagtcaagcagagaattgttgattgtaatgcatgtatt
gcttttgttgaactagaaaaagtttgtaaatttcagccactggggattcctgtgattggt
gtaccagaaaatgtaaattttgatgagaaaagtaatgactttgaagctttctatatgcta
gtttatagtaagggtgatgtgggtgtaaagccagtgattaggcagcaagatacagcagca
ataatgtattcttcaggtactactgctgctagtaaaggggttgttctaacacataggaat
tttatatccatggttgagctttttgttaaatttgaggcttcacagtacgagtattcgagt
acggataatgtgtatttagctgttttgccaatgtttcatatatatgggctgtcgcttttt
gttgtgggattactgtcactggggtctagcattgttgtaatgaggaaatttgatgtcagt
gagatggtgaaggtgattgataggtatggagtaactcattttccagttgttccgccaata
ctgactgcgttgacaaggactgcaaaaggtgtttgtggaaatagcttgaagtgtttgaag
ctggtttcatgtggagcggctcctttgtttggcaaaaccatacaggattttgtggaggtt
cttccgcatgttgatttcattcagggatatggcctgactgagtcaacggctgtaggaacc
cgtggcctcaacactgaaaaattccaaaaatattcttccatcggacttttggctccaaat
attgaagctaaagtggtggattggattactggagctttattgcctcctgggggaagtggt
gagctttggattcggggacctggagttatgaaagagtatttaaacggtggagaggcaact
gcattgaccattgacaaagatggttggctacataccggggatgttgtttatgctgatcat
gatgggtacttatatgtagttgaccgcttgaaagagattatcaagtacaagggctttcag
attgctcctgctgatttagaggctgtattgatttcccattgtgagatacttgatgctgct
gtaatacctgtcgtcgataaagaatgtggagagataccagtagcgtttgtagtcaagagg
cagggaagcatgctaacacaggaagctattatcaactatgtggccgagcaggtcgcacct
tataagaaggttaggaaggtgatctttacacaatcaatcccaaagtctgcagctggaaag
atactccggagggagctcaagtgctccctgacttctaaactgtaa
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