Populus trichocarpa (black cottonwood): 7493407
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Entry
7493407 CDS
T01077
Name
(RefSeq) FIP1[V]-like protein isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
7493407
NCBI-ProteinID:
XP_002324551
UniProt:
B9IMG1
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Position
18:12796943..12808810
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AA seq
1348 aa
AA seq
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MEDDDEFGDLYTDVLRPFSSSLSSAPQPLSATSSLHRPIDLNDAIKDDDDDILHVVSHRN
PSAPSNQNPIEITAFSAPQVRVLGDAESPIKGSIAEDRDLNFDIEDVNTGILEDSRPIIP
GLMEDDSTKIEASAVVSGGGGGGGDWEEDEESDSEDDLQIVLNDNSHPGGPMGIDREIGD
DDDDDEDGDPLVIVTDGDGPNQAIEEKDWGGGEDGVAAVGGGAEGERKEGGEATGKGNAV
VGPKIGYNNHGYHHHPFHSQFKYVRPGAALMPAAPIVGPGGTPGQVRPPMNMSTIAGRGR
GDWRPVGIKGGPQKNFHPGFGGPAWGAGRGFGSGLEFMLPSHKMIFDVDIDGFEEKPWKY
SGVDVSDYFNFGLNEESWKDYCKQLEQYRLETTMQSKIRVYESGRAEQEFDPDLPPELAA
ATGFRDAPADNSNAGKSDNAQSDWTKGSARFRAQIPTGRAIQVETGHGERIPSIEGRAPR
LRDSDAIIEIICQDSLDDSSTGDGVQDAANDEPQRDDFRGSDVAEDDMAETENEYAGDFP
QAYNDRKGGRTPHMNSARNMPEGDGVSPFHPEATAPYPHAGSRGHPPSYPGRDFGTPREE
RQMQGRSRDRSPHLTPAQSSCDKKFVDNAEEESTESMVGKHSLRVSSPITVQDARELSSE
KKDDPEPLQAEGSSRLGRDEMSENEETTNDTPKDGNMHHSTRKQKVSSHVEQPALQQLDD
EEDSKAARSSENSKARSGSSKDYQKWKDGVEEEVVQGGRSTRSGSIRRHLDENEQNFRRK
DRDVRHEMERSRVIIRGREDSYPRRDLDPSLPHHLHMKHEGYDRRKERENSDISWQQRDE
DPHSSKHRTEDRKRELGDEMGSRHRSKIRETERSDKDEHLHPRKQLENGSYRIHHDKDGS
SQHRERDDSLKSRFEMVDDYHSKRRKDEEYMKREYADKEEILHGHRENTSRRRRERDDQQ
WIRDNLDDYHSVRHKDEVWFQRERGERPREREDLYRLKQSNEENLPRREREEGRASARSG
RGVDDKAWAGHPRGKDEYKVSDKDYQLKDAVRSSEHQKRRDRMEDESLSHHRVRDDVYAR
GNQFSSDERRSRQERSSTRIDRTLDTSDNQRVHEKKHKENTRKNKESDGGDHGTLGPSRR
NQEDQSGHSDEMILKRSRAPGNGDAGISIQRNSSKRHKEDASSDDEQEDLRRGRSKLERW
TSHKERDYNISKSSASLKFKEIHRNSNSNGRSLEGSKLPNELPKKVEVVEKRTKVETVEK
HPVSEEKDVAEVVNKDTDMKPSEDRHLDTVEKLKKRSERFKLPMPGEKDALAIKKMENEA
LPSVKPETPADSEIKPERPPRKRRWISN
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgacgagtttggagatctctacactgacgtcttacgtccattctcttcg
tctctatcctctgctccccaacctctctccgcaacctcttctctccaccgtccgatcgat
ctcaacgacgcaatcaaggacgatgacgacgatatcctccacgttgtttcccaccgtaac
ccctctgctccctccaaccaaaatccaatcgaaatcaccgccttttcagctcctcaagtt
agggttttgggagatgcagaatctccgattaaaggttcgattgccgaggacagagattta
aattttgatatcgaggatgttaatactgggattcttgaagattcgcgaccgattatacct
ggattgatggaggatgattctacaaagattgaagcttctgctgtggtcagtggcggcggc
ggcggcggaggggattgggaggaggacgaggagagtgacagcgaggatgatttgcagata
gtgttgaatgataatagtcatcctggtgggcccatggggattgacagagagattggtgat
gacgacgatgatgatgaggatggggacccgcttgtgattgttacggatggggatggaccg
aatcaagccatcgaggagaaggattggggtggcggcgaggatggggttgctgctgtagga
ggtggggcggaaggggagaggaaggaaggaggagaggcgacagggaaagggaatgcagtg
gtgggaccgaagattgggtataacaatcatgggtatcatcatcatccgtttcattctcag
tttaagtatgtgagacctggggcagctctgatgcctgcagctcctattgttggtcctgga
ggaactccaggtcaagttcgtcctcccatgaacatgagtactatagctggtcgtggtaga
ggtgactggcgaccagtaggaataaaaggtggtcctcaaaagaacttccatccaggattt
ggaggccctgcttggggtgcagggcggggttttggcagtggactggaattcatgcttcct
tcccacaagatgatatttgatgttgacattgatggctttgaagaaaagccatggaaatat
tcgggtgtggacgtatcagactatttcaactttggtttgaatgaagagagctggaaagat
tattgcaaacagctggaacaatatcgactggagactacaatgcaaagcaaaattcgtgtt
tatgaaagtgggcgggcagagcaggagtttgatcctgatttgccaccggaattagcagca
gcaacaggtttccgtgatgctccagctgacaattcaaatgctggaaagtcagacaacgca
cagagtgattggactaaaggatctgctcgtttccgggcccaaataccaactggcagagca
atacaagttgaaactggtcatggtgaacgcatcccttccattgaaggccgagctcctcga
cttcgtgattctgatgcaattattgagattatctgccaggactctctagatgattcctcc
acaggagatggtgtccaggatgcagcaaatgatgaacctcaaagagatgactttagagga
agcgatgtagccgaagatgacatggcggagacagaaaatgaatatgctggtgattttcca
caggcttacaatgatcgaaagggtgggagaacacctcacatgaattctgcccgcaacatg
cctgagggagatggggtttcgcccttccatcccgaagcaacagctccatacccccatgct
ggttctaggggtcaccctccttcgtaccctggtagggactttggcactcctcgtgaggaa
aggcaaatgcagggaagatcccgtgacagatcacctcatttaactcctgctcaaagctca
tgtgacaagaaatttgttgataacgcggaggaagaatcaactgaaagtatggttggtaaa
cacagtctgcgggtatcatctcccatcacagttcaggatgcaagagagttgagttctgag
aaaaaagatgatcctgagcctttgcaagctgaaggaagctctagattgggaagggatgaa
atgagtgagaatgaagaaaccactaatgatactcccaaggatggaaatatgcaccattct
actaggaaacaaaaagtaagttctcatgtagaacagcctgcattgcaacagcttgatgat
gaggaagactcaaaggctgcaagaagcagtgaaaatagcaaagcaagatcaggcagtagc
aaagattatcaaaaatggaaggatggtgttgaggaggaggttgttcaaggtggacgttct
acacgctcaggtagcatcagaaggcaccttgatgaaaatgaacagaattttcggagaaag
gatcgtgatgtgagacacgagatggaaagaagtcgtgtcataataagagggagggaggat
tcttatcctcgcagagacttggatcctagcttgccccatcatttgcatatgaaacatgag
ggctatgataggagaaaggagcgagaaaattctgacatctcttggcaacaaagagatgaa
gatccacatagtagcaaacatagaactgaagacaggaagagggaacttggagatgaaatg
ggatctaggcaccggagtaagattcgggagactgagaggagcgacaaagatgaacatctt
catccaagaaaacagttagagaatggcagctacaggattcatcatgacaaggatggtagt
tcacaacacagggaaagagatgacagtttgaagagtagatttgaaatggtagatgactac
cacagcaaacggaggaaagatgaggaatatatgaaaagagaatatgctgataaggaggag
atcctgcatggccacagagaaaataccagtcgccgcaggcgtgaaagagacgatcagcaa
tggattagagacaatcttgatgactatcactctgttaggcataaagatgaggtctggttc
caaagagagaggggtgagaggccgagggaaagggaggatttgtataggctaaaacaatcc
aatgaagaaaacttaccaagacgggagagagaagaaggacgagcttctgcgaggagtggg
cgtggtgtggatgacaaagcatgggctggccatcctagggggaaagatgaatataaagtt
tctgataaagactaccaacttaaagatgctgttcgaagcagtgaacaccagaaaagaagg
gaccgaatggaggatgaaagtctttcacatcatagggtgcgggatgatgtttatgcacga
ggaaatcagtttagtagtgatgagagaagatccaggcaggaaaggtcaagcactcgcatc
gatcggactctggatacttctgataaccagagggtgcatgagaagaagcataaagaaaac
acaaggaagaacaaagaatctgatggtggagatcatggcactttgggcccttccagaaga
aaccaagaagaccagagtggtcacagtgatgaaatgattttaaaacgctctcgtgcgcca
ggaaatggagacgctgggatctcgatccaacggaactcttccaaaaggcacaaggaagat
gcttcctcagatgatgaacaagaagatttaaggagaggacgctcaaaattggaacgttgg
acaagccataaagagagggattacaacatcagcaagtcatcagcttccttaaagtttaaa
gagattcataggaatagcaatagcaatggcagatccttagaaggcagtaaacttcccaac
gaacttcccaagaaagttgaggttgttgagaagcgtaccaaagtcgagactgttgagaaa
catcctgtgagcgaagagaaagatgttgctgaagtggtaaataaggatactgatatgaag
ccatcagaggaccggcacctggacacggttgagaagttgaagaagcggagcgagaggttc
aagcttccgatgccaggtgagaaagatgcccttgcaataaaaaagatggagaatgaggca
ctaccttctgtcaaacccgagacccctgcagattcagagattaaaccagagcggcctcct
cgaaaacgaaggtggatcagcaattga
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