Populus trichocarpa (black cottonwood): 7493894
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Entry
7493894 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7493894
KO
K02988
small subunit ribosomal protein S5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
7493894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
7493894
Ribosome [BR:
pop03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
7493894
Bacteria
7493894
Archaea
7493894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5_C
Ribosomal_S5
Motif
Other DBs
NCBI-GeneID:
7493894
NCBI-ProteinID:
XP_002319240
UniProt:
B9I6U1
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All DBs
Position
13:6417505..6421920
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AA seq
518 aa
AA seq
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MNPKSWSRLLLYQSLKKPRKPPMPQLSRKISTFPHFPSTQTLSLSRFSKTHFSTFSGASS
SVARELLNELEREKQKEREARRRNGLDTKDIDAEDEEDYLGVGPLIEKLEKRIQKDAGKP
EVYDNEAADSDSDDDSWFSTDAAKKRDELFLKKFDKHEELVKNFAEAETLDDAFKSMKKI
DNFEQKHFRLRPEYRVIGDLINLLKVAEGKDKFILQHKLNKAMRLVEWKEAYDPNNPANY
GFFQRAGVGPGGHALEDAESEKQKKKTPGVDVEGKEDEDDGGKEDEDDEDEEDEFDDMKE
RDDILLEKLNEIDKKLEEKLAELDYTFGKKGKVLEEEIRNLAEQRNSLTEKKRRPMYRKG
FDDRVINVNRTCKVTKGGRVVKYTAMLACGNYHGVIGFAKAKGPRVHVAIQKAREKCFQN
LHYIERHEEHTIANAVQTQYKKTKLYLWPAPTRTGMKAGKTVKAILNLAGFKNVKSKVIG
SRNPYNTVRALFKALNAIETPKDVQEKFGRTVVEKHLL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaatcatggtctcgcttactcctctatcaatccctgaaaaaacctagaaaa
cctccaatgccccaactttcccggaaaatctcgactttcccccactttcccagcacccaa
acactctcactctcccgtttctccaaaacccatttctcaactttctctggtgcctcctcc
agtgtagcccgggaacttctgaatgagctagagcgcgagaaacagaaggaaagagaggca
agaaggcgaaatggtctcgatactaaagacattgatgcagaagatgaagaagattacttg
ggtgtgggtccattgatagaaaaattagagaaaaggattcaaaaggatgcagggaagccg
gaagtttatgataatgaagctgctgattcggatagtgacgatgatagctggttttctact
gatgctgctaagaaaagagatgaactttttttaaagaagtttgacaaacacgaagagtta
gtcaagaacttcgctgaggctgagacacttgatgatgcattcaaatcgatgaagaaaatt
gacaattttgagcaaaaacattttcggcttcgtcctgagtatagagtgattggggatttg
attaatcttttgaaggtagcagaaggaaaggataaatttatccttcaacacaaattaaac
aaggcaatgagattggtggagtggaaggaagcttatgatcccaataatcctgccaattat
ggattttttcaacgtgcaggagtgggaccaggtggccatgccttagaagatgctgaatct
gagaagcaaaagaaaaaaacaccaggtgtggatgttgagggcaaggaggatgaggatgat
gggggcaaggaggatgaggatgatgaggacgaggaagatgagtttgatgacatgaaggag
agggatgatatactgctagagaagctgaatgagattgacaagaaactagaagagaagtta
gcggagttggattatacttttggaaagaaggggaaggttcttgaggaggagataaggaat
ctcgcggagcagagaaattctttgacagaaaagaaaagaagaccgatgtaccggaaaggt
tttgatgacagagtgataaatgtgaatcgaacttgtaaagttaccaagggagggcgagtg
gtcaagtacactgccatgttagcttgtggtaactatcacggtgttattggttttgctaaa
gctaaaggcccaagagtccatgttgctatccagaaggcacgtgagaaatgcttccagaat
ctccactacatagagcgccacgaggagcatacaattgcaaatgcagtacaaacacaatac
aagaaaaccaagctgtatctgtggcctgccccaactagaacaggcatgaaagcaggaaaa
actgtcaaggccattttgaatttagctggtttcaaaaatgttaaatccaaggtcattggt
tctaggaatccttataacactgtcagggctctctttaaagctctgaatgctattgaaact
ccaaaggatgtccaagagaagtttggccggactgttgttgagaaacatttgctatga
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