Populus trichocarpa (black cottonwood): 7494511 Help Entry 7494511           CDS       T01077                                  Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04144   Endocytosis Brite KEGG Orthology (KO) [BR:pop00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     7494511  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pop04131]     7494511   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pop04147]     7494511 Membrane trafficking [BR:pop04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     7494511 Exosome [BR:pop04147]  Exosomal proteins   Proteins found in most exosomes    7494511 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Totivirus_coat Motif Other DBs NCBI-GeneID:  7494511 NCBI-ProteinID:  XP_002311238 LinkDB All DBs Position 8:4327666..4339253 Genome browser AA seq 1705 aa AA seqDB search MAAANAPITMKEVLTLPSIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMHMPMQ PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI TPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLQSNQIINYKCDPSEKWLVLIGIAPGS PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLISFATKSFNAGQVTS KLHVIELGAQPGKPSFTKKQADLFFPPDFVDDFPVAMQISHKYSLIYVITKLGLLFVYDL ETATAVYRNRISPDPIFLTAEASVVGGFYAINRRGQVLLATVNEAMIVPFVSGQLNNLEL AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ PGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECTEELGDLV KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYSPDYLFLLQAMLRSDPQ GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYTELPDIKRVIVNTHAI EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQAAKEYCEQLGVDACVKLFEQFK SYEGLYFFLGSYLSSSENPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA KLPDARPLINVCDRFGFVADLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE EAFAIFKKFNLNVQAVDVLLDNIQSIDRAVEFAFRVEEDAVWSQVAKAQLREGLLSDAIE SFIRADDATQFLEVIRAAEDANVYHDLVKYLLMVRQKAKEPKVDSELIFAYAKTDKLTDI EEFILMPNVANLQNVGDRLYNETLYEAARIIFQFIANWAKLAITLVKLKQFQSAVDAARK ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL ALRVDHTRVVDIMRKAGHLLLVKPYMIAVQSNNVSAVNEALNQIYMEEEDYERLRESIDL HDNFDQIGLAQKVEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD RELAEELLVYFIEKGKKECFASCLFVCYDLIRPDIALELAWMNNMIDFAFPYLLQFVREY TGKVDELVKDKINAQNEVKTKEQEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPTMGGGF APPPPMGGMGMPPMPPFGMPPMGSY NT seq 5118 nt NT seq  +upstreamnt  +downstreamnt atggcggcagctaacgccccgatcaccatgaaagaagtcttaactttaccgtctatcggt attagccctcaatttattacgtttacgaatgtaacgatggaatcggacaagtatatatgt gtacgtgaaacagctccgcaaaatagtgttgtaattattgacatgcacatgccaatgcaa ccgctgagacggcctatcactgcagattctgcactcatgaatccaaattctagaatcctt gctttgaaagcccaacttccaggaactactcaggatcacttgcaaatatttaacattgag atgaaagcaaaaatgaagtcataccagatgcctgagcagattgtcttttggaagtggata accccaaagatgctgggcctggtcacacagacctctgtttatcattggtcaattgaaggt gattctgaaccagtgaagatgtttgaaagaacagctaatttgcaaagcaatcagattata aactataaatgtgacccttctgagaaatggttggttttgattggaattgctcctggttca cctgagaggcaacaattggttaaagggaacatgcaacttttctctgtggatcaacaacgt agccaagctcttgaagcacatgctgcatcatttgcgcaatttaaggttccaggaaatgag aacccttccactctcatttcttttgccacaaaatctttcaatgctggacaggttacatcg aagttgcatgttattgagcttggtgcccagccagggaagccatcatttacaaagaaacag gcagatctgttctttcctcctgattttgtcgatgactttcctgtggcaatgcagatatcc cacaaatacagtttgatttatgtgatcacaaagcttgggctactatttgtttacgatttg gagacagctactgctgtgtacagaaacagaattagtccagatccaatatttttgacagcc gaggcttcagtggtgggggggttttatgccattaataggcgaggccaggtgttacttgct actgtaaacgaggctatgattgtgccatttgttagtggccagttgaacaatctggagctt gctgtcaatcttgccaaaagaggaaaccttcctggtgctgagaatctggttgtccagcgt ttccaagaactgtttgctcaaacaaagtataaagaagccgctgagcttgctgctgagtct ccacaaggaattctccgaactcctgacacagttgccaagtttcagagtgtacctgtgcaa cctgggcaaactcctcccttattacaatattttgggacccttttaacaagaggaaagctc aatgcatttgagtcgttggaattgtcccgccttgtggtcaatcagaacaaaaagaacctt ttggagaactggctggcagaggacaaattggagtgcaccgaggaactgggagaccttgtg aagactgtggataatgatcttgcgctgaaaatatatattaaagccagggcaactcctaaa gttgttgctgcttttgctgagagaagggagtttgacaaaatcttgatttactcaaagcag gttgggtattctcctgactatttgttccttctgcaagcaatgctccgttcagatccacag ggagcagttaactttgctttgatgatgtcccaaatggaaggtggctgtccagttgactac aacacaattactgatctgtttcttcagagaaacttgatccgcgaggcaacagcctttctg ttggatgttttgaagccaaatttaccagaacacggttacctccaaacaaaggttctggag ataaatctggtaacatttcctaatgtagctgatgctattctagccaatggaatgtttagc cactacgatcgtcctcgaattgcacaactctgtgaaaaagctggtctctacatccgagcc ctgcaacattatacagagttgcctgatattaaacgtgtgattgtgaatacacatgcaata gagccacaggctcttgttgagttttttggaactctttcacgagaatgggctttggaatgc atgaaggatcttttactggtcaatctaagaggcaaccttcagataattgttcaggctgcc aaggaatattgtgagcagttgggtgttgatgcatgcgttaaactttttgagcaattcaag tcatatgaagggctgtactttttcttggggtcatatctgagttccagtgagaatcctgat atacattttaagtacatcgaggctgctgctagaacaggacaaataaaggaggttgagcgt gttactagagaatcgaatttttatgatcctgaaaagacaaagaactttctaatggaagcc aaacttccagatgcaaggcctttgattaatgtttgtgaccggtttggctttgttgctgat ctcactcactacctctactcaaacaacatgctacgctatatagaaggttatgttcaaaag gtgaacccagggaatgcacctttagttgtggggcagctgttagatgatgaatgccctgaa gactttatcaagggtcttattctttctgtccgttctttgcttccagttgagccccttgtg gaggaatgtgagaagagaaatcgacttcgtttgcttactcaattcttggaacatcttgtg agtgagggaagccaagatgtacatgttcataatgctcttggtaaaatcattattgatagc aataacaacccagaacacttccttaccaccaacccttactatgattcacgggttgtgggc aagtattgtgagaaacgtgatcccaccctggctgttgtggcataccggagaggacaatgc gatgatgaactcatcaatgtcacaaataagaactctttgttcaagttgcaagcaagatat gtggttgaaaggatggacggtgatctttgggagaaggttcttaatcctgaaaatgaatac cgaagacagcttattgatcaagttgtatctactgctttgccagaaagcaagagcccagaa caagtttctgctgctgttaaagctttcatgacagctgatctgccccatgaattgattgag cttcttgaaaagattgttctccaaaactctgctttcagtggaaatttcaatcttcaaaac ttacttatcttgacagcaattaaggcagatccttcaagggtcatggattatattaataga ttagataactttgatggacctgctgttggggaagtggcagttgaagctcagttatatgag gaagcatttgcaattttcaagaagttcaacttgaatgttcaggctgttgatgtcttattg gataacatccaaagcattgaccgtgctgtggagtttgcattccgtgttgaagaagatgct gtttggagccaggtggcgaaggcccaactcagagaggggctcttgagtgatgcaattgag tcatttatccgtgcagatgatgctactcaattcctggaagtcattcgtgctgctgaggat gcaaatgtatatcatgacttggtgaagtaccttctcatggttaggcagaaggcaaaagag ccgaaggtggacagtgagcttatttttgcatatgcgaagactgataagttgactgacatt gaggagttcattctcatgcctaatgtggctaatctccaaaatgttggtgatcgcttatat aacgaaactctatatgaggctgcaagaataatattccaatttatagcaaactgggccaaa ttggcaatcacattagtgaagttgaaacagttccaaagtgctgttgatgcagctcggaaa gccaacagtgcgaagacatggaaggaagtttgctttgcttgtgttgatgccgaggagttc cgtttggctcagatatgtggtcttaacatcattatacaggtggatgatttggaggaggtc agtgaatattaccagaacagaggatacttcaatgaattgatctctctcatggagagtggt ttaggtttagaacgtgcacatatgggcattttcacagagttgggagtgctgtatgctaga tatcgtcctgagaagcttatggagcacattaaattattctcaactcgtctcaatattccc aagcttatacgagcatgtgatgaacagcaacattggaaggaacttacctatctgtacatt caatatgatgaatttgataatgctgcaactaccattatgaaccattctcctgaggcctgg gatcacatgcaattcaaagatgttgctgtcaaagttgctaacgtggagctatattataag gctgtgcatttctacttgcaagaacatcctgatcttatcaatgatcttctcaatgtgctg gcactccgtgtggaccatactcgtgttgttgacataatgcgaaaggcaggtcatttgctt cttgtgaagccatatatgattgcagttcagagcaacaatgtgtctgctgtgaatgaggct ttgaatcaaatttacatggaggaggaagactatgaaagattgcgtgaatccattgatttg cacgataactttgatcagataggccttgcacagaaggttgagaaacatgagcttcttgaa atgagacgtgtggctgcatacatttacaagaaggctggaagatggaagcaatccattgca ttgtcaaagaaagataacctatacaaagatgccatggagacagcatcacagtctggtgat cgtgaacttgcagaggagttgctggtttatttcatcgaaaagggcaagaaggaatgcttt gcatcatgcctctttgtttgttatgatttaattcggccagacattgcccttgagcttgcc tggatgaataatatgatcgactttgccttcccataccttttgcagtttgttcgtgaatac acgggcaaagttgatgaacttgtgaaggacaaaattaatgcacagaatgaagtcaagacc aaagagcaggaagagaaggatgtcattgctcagcagaacatgtatgctcagttacttcct cttgctttgcccgcgccgccaatgcctggtatgggtggaccaacaatgggaggaggtttt gctccaccaccacccatgggtggaatggggatgcctccaatgccaccttttggcatgcca ccaatgggcagctattga

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