Populus trichocarpa (black cottonwood): 7494541
Help
Entry
7494541 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL7
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7494541
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
7494541
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
7494541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7494541
NCBI-ProteinID:
XP_002305282
UniProt:
B9H3P7
LinkDB
All DBs
Position
4:8943427..8946853
Genome browser
AA seq
543 aa
AA seq
DB search
MEKSGYGRDGIYRSLRPKLVLPKDPNLSLVSFLFRNSNSYPHKPALIDADLSITLSFSEL
KSIVIKVAHGLLNLGISKNDVVLIFAPNSYQFPICFLAITSTGAIATTANPLYTTSELSK
QIKDSNPKLIITVPELWDKVKGFNLPAVFLGPKRVSLPLESGSRITSFDSLVGLGGSNSQ
FPSSNVKQSDISTLLYSSGTTGVSKGVILTHGNFIAASLMVTMDQAMAGEMHDVFLCFLP
MFHVFGLAVITYSQLQMGNAVVSMGKFEFEMVLKTIEKHRVTDMWVVPPVVLALAKQDMV
KKYDISSLRNIGSGAAPLGKDLMKECAKNLPDTIISQGYGMTETCGIVSVEDSRLGVRHS
GSAGILAAGIEAQIVSVETLKPLPPNQLGEIWVRGPNMMRGYFNNPQATKDTMDKKGWVH
TGDVGYFDDDGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGE
VPVAYVVRSPNSALTEVDVQKFIADQVAPFKRLRKVTFINTVPKSASGKILRRELIQQVK
SKI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatctggttatggtcgtgatggtatttacaggtcactaagaccaaaacttgtc
cttcctaaggatcctaacctttctttggtctcgtttctttttagaaactccaattcttac
cctcataaaccggctcttattgatgcggatttgtctataaccttatctttttcagagctc
aaatccattgtcatcaaggtcgctcatggattactcaacctgggcatctccaaaaatgat
gttgttcttatctttgctcccaattcttaccaattccctatctgtttcttggctatcact
tccactggtgctattgcaacaactgcaaatcctctttatacaacctcagaactttcgaaa
cagattaaagattctaatcccaagttgattattacagtccctgaattgtgggacaaagtc
aaaggtttcaatttgcctgctgtctttttaggacccaaacgagtgtctttgccgttggag
tcaggttctagaatcacaagtttcgattctttggttgggttaggaggatctaattctcag
tttccttccagtaatgtgaagcaaagtgatatatctacgcttttgtattcgtcagggact
acaggggttagtaaaggagtgattttgacacatgggaatttcattgctgcttctttaatg
gtcaccatggatcaagcaatggcaggtgagatgcacgatgttttcctttgtttcttgccc
atgtttcatgtgtttggattggctgtgatcacttactcacagctacaaatgggaaatgct
gttgtgtcaatgggaaagtttgaatttgagatggttttgaagactattgagaagcacaga
gtgaccgatatgtgggttgtgcccccagtggtgcttgctttggctaaacaggatatggtt
aagaagtatgacatttcgtcgttgagaaatattggttctggtgctgcccctctgggaaaa
gatttgatgaaggaatgtgccaagaatttgcctgatactataatttctcagggctatggc
atgactgaaacttgtggcattgtatcagtggaggattcgagactaggtgttcgacattct
ggctctgctggaatacttgctgcaggaattgaggcccagatagtcagtgtggaaactcta
aagcctctccctcctaatcagttaggggaaatatgggtcaggggacccaatatgatgaga
ggttatttcaataatccgcaagccacaaaagataccatggataaaaagggttgggtccat
actggagatgttggatattttgatgatgatggacaactttttgtggtcgatcggattaaa
gagctcatcaagtataaaggttttcaggttgcacctgcagaactggaagggctgctagtt
tctcatcctcaaattttggatgctgttgtcatcccatatcctgatgctgaagctggtgag
gtcccagttgcatatgttgtgcgctcacccaatagcgcactgactgaagtagatgttcag
aaatttattgctgatcaggttgcacctttcaaaagattgcggaaggtgactttcataaat
actgtacctaaatcagcttcaggaaaaatcctcagaagagagctcattcagcaagtaaaa
tccaagatatga
DBGET
integrated database retrieval system