Populus trichocarpa (black cottonwood): 7495671
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Entry
7495671 CDS
T01077
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a isoform X2
KO
K14972
PAX-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7495671
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
7495671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Motif
Other DBs
NCBI-GeneID:
7495671
NCBI-ProteinID:
XP_024459317
LinkDB
All DBs
Position
6:1939693..1946808
Genome browser
AA seq
965 aa
AA seq
DB search
MITPSSDPEFLTRLTNIAVQFEDKTFRISATKESYVYTIGKKMNSFGPIKSEASKTTGKS
SSGLGQTLIANDVGQSSETNAGTRFSQRLVGNNFVEQNMQPNITFNSRREMLGSQSSDQK
LKYQLQQQEFQDGILKDKVQNTSKSFVIQPDILHSQPHQRQQHVTSQNTQNQFSQPPSVK
TQYRQTPFAQPSNSPMFQQNQQLGKQRDDSEQLQWSIPQQNVLPSFQQPLGQQRDVSRMQ
LQQKMAGSQPFIFNAQSHRSSSPMIQQPGVTASEQEVHKITQPGQLHQILGSQKQSGLSQ
EGIQRKPQTSASFHQQRSIADQQKLFQSQISFAGSSSASLEPKSSGQLTNTADELDEAYQ
KLQCFKLQYGPQLKKLYIYFKSLLDKATDPELVRKNMKQVIWIEKAMQVFSLQRNQMKNA
SKEKLETTKDAIVKYVNLFRQKRVASVEQQAELSLPTSGQSQISQPPQSWNGKLQFPLVN
LTMTNGLGNSSPTSSMQSRVPNSQPNFVSSLQYSSGMGLEQKNGPSTFQKSARKTGQYFA
GSPQNNNFFSNSNVNAFDSPFTHYTRLLQNFEQQMQKQTIQLKKEQMLMRNSQSCVTPAI
ESTENLHQLQIPTTINQLYSSSPRKSQLSSAQIDQQNFPSASTPLTPTSRYVALTQVDNQ
TQSQNQSTATDTPGISASPLLEEFTSPSNASDTNQPFQRLLRAVESMSPGVLSAAVQDID
SVVNMVDKIAGGLAEGHSQAAIGEDLVSETRFRVQEMNLAYQQSSIYEREMEQKFSAMTW
DTVGQPMHRKSDFDSTTTPKLNNLRIKPNKDLLDEIRRVNQRLVETLVEVDSTDDDSILP
ESSKGTIIKCSYTAVSLSGDLKSLSSSPTFPVLILRLLVPADYPNTSSVIFDKLPVGCEE
PEDLSEKTKLRFSTALRNLSESMSLLEIAKTWDACCRAVLLEFVKPFGGGCFSSRYGKWE
DFFTI
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgccttcttccgatcctgagtttttaactcgactaacgaacattgctgtgcaa
ttcgaggataagacattcagaatttcagcaacgaaggaaagttatgtatatacaataggt
aagaagatgaattcgtttggtcccatcaagtctgaagcttccaagacaactggtaaaagt
tcctcaggtctaggtcagaccttgattgcaaacgatgttgggcaaagctcggagacaaat
gccggcacacgattttcccaacgtttagtcggtaataattttgttgaacaaaatatgcaa
ccaaatattacttttaactctcggcgggaaatgctaggaagccagtcttcagatcagaaa
ctgaagtaccaattacaacagcaggagtttcaggatgggatcctgaaggataaggtccag
aatactagtaagagttttgtcatccaacctgacattctacacagccaacctcatcagcgg
cagcagcatgttacatcacagaatactcagaatcaattttctcagccgccatcagtaaaa
acacaataccgtcaaacaccatttgcacagccatcaaatagcccaatgtttcaacagaat
cagcaactcgggaagcaacgtgatgattcagagcagttacaatggtcaattccccaacaa
aatgttttaccgtcattccagcagcccctgggccaacaaagagatgtttctagaatgcag
cttcagcaaaaaatggctggatcacaaccatttatcttcaatgctcaatcgcatcggagt
tcaagccccatgattcaacaaccaggggttacagcttctgaacaagaagttcataaaatc
acacagcctggtcagttgcatcagattctgggttctcaaaaacaaagcggcttgtctcaa
gaagggatccagcgaaaaccacaaacctcagcttccttccatcagcagaggagtatagct
gatcagcagaagctttttcagtcacagatatcatttgctgggtcctcctcagcatcacta
gagcccaaatcatcaggtcaactaaccaatacagctgatgagcttgatgaggcctatcaa
aagcttcaatgctttaagctacagtatggtccacaactcaagaaactatacatatatttt
aagtccttacttgacaaggcaacagatccggagctggttagaaagaacatgaagcaagtg
atttggatagaaaaagccatgcaggttttttcattacagcgaaatcagatgaaaaatgct
tccaaggagaagttggagacgaccaaggatgcaattgtaaagtatgtaaacctctttcgg
cagaagagagttgcctcagttgagcaacaagcagaacttagtctgccgactagcggtcaa
tcccaaatatctcagcctcctcaaagctggaatgggaaactccaattccctctagtgaat
ttaactatgacaaatggtttgggaaattcatctcccacatcttcaatgcagtcaagggtt
ccaaattcgcaacccaattttgtcagttcacttcaatatagttctggaatgggtttggaa
caaaagaatggaccgagtacgtttcagaagtcagcaaggaaaacaggccaatattttgct
ggttcaccacaaaataataatttttttagcaatagcaatgtgaatgctttcgattctcca
tttactcattacacaaggctgttacagaacttcgagcaacaaatgcagaaacaaactatt
cagctcaaaaaggaacagatgctgatgcgcaacagtcaatcatgcgtcactccagctatt
gaatctacagaaaatctacatcaactacagataccaactactataaatcaactatactcc
agttctcctcgaaagtctcagctctcttctgctcaaattgaccagcagaattttccttca
gcctctactcccttgactccaacttcaagatatgttgcattgacccaagttgataaccag
acacaaagtcaaaatcaatctacggcaaccgacacacctgggatatcagcctcccctttg
ctcgaagagttcactagcccctccaacgcatctgatacaaatcaaccattccagcgccta
cttcgagctgtagaatcaatgtcaccaggggtattaagcgctgctgtccaggatattgac
tcagttgtcaacatggtcgataagattgctggaggattagctgaaggacactctcaggct
gctattggtgaggatttggtgtctgaaacaaggttccgtgtacaagaaatgaacttagca
taccaacagtcaagcatttatgagagagagatggagcagaaatttagtgccatgacctgg
gacacagtcgggcagccaatgcatcggaaatctgattttgattcaactacaacaccaaag
ctcaataatttgaggatcaagcccaacaaagatctgctggatgaaatcagacgtgtaaac
cagcgattggtcgaaactttagtagaagttgattcaactgatgatgattctatattacct
gaatctagtaaaggaacaatcatcaagtgttcctatactgctgtgtctcttagtggagat
ttaaaatctttgtcttcatctccgacgttccctgtacttatcttgcgcttgcttgttcca
gccgattatcctaatacttcttctgtaatctttgataagttacctgttggttgtgaagag
ccagaagatttgtcagagaagacaaagttgagattcagcacagctcttaggaacctttct
gaatccatgtctcttctggagatagcaaagacttgggatgcttgttgtcgagctgtgctc
ttagagtttgttaaaccatttggaggaggatgtttcagttcgagatatggcaaatgggag
gatttctttactatataa
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