Populus trichocarpa (black cottonwood): 7496486
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Entry
7496486 CDS
T01077
Name
(RefSeq) protein CHUP1, chloroplastic isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
YabA
Atg11_middle
Motif
Other DBs
NCBI-GeneID:
7496486
NCBI-ProteinID:
XP_024467029
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Position
10:299075..306724
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AA seq
550 aa
AA seq
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MSQHSTTPSRHRVNFKTPKPAEVANNGSPVPSPANKTRAKSVPPDVKKDTKVRKSLVGNN
KPKSGELVVGSQDVTVVGRSVNRPGSEQFARPRRQRPVLDPINASRRNEEESYKKGLHEK
LELSETLINDLQSEVLALKVELDKANGLNQELELQNKKLTEDLAAAEAKVSALNTRHQSK
ESVGEHQRPRFKDIQKLIAIKLENSPVKKEAINGPSKVKTPQSPPPPPVPRFISKADVAE
RKAPTCPSLMPPPPPPPLPPMRPLARATTAPKTPAIVEFYNSIRKQEGKRDSPGLRSQYK
PEKTSAHSSIVGEIQNRSTHLLAIKADIETKGDFINGLIQKVLAAAYTDIEDVLKFVDWL
DGELSSLADERAVLKHFKWPEKKADAIREAAIEYRGLKLLESEISSFKDESNNPCGTALK
KMAVLHDKSERSIQKLIKLRNSVMNSYQAWKIPTDWMLDSGIVSKIKQASMRLAKMYMKR
VITELELARNSERECNQEALLLQGLHFAYRAHQFAGCLDSETMCAFEEIRQRVPGHLGGS
RELLAAIPSS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacattccacaaccccatctcgacacagagtcaattttaagacgccaaaacca
gccgaggttgctaataatgggtcaccagtaccatcaccagccaacaaaacaagagcaaaa
tccgtgcctccagatgtgaagaaagacaccaaggtaaggaagtcgctggtggggaacaac
aagccaaaatctggagagctggttgtgggatctcaggatgtaacagtggtgggtcgctcc
gtgaaccgaccaggtagcgagcaatttgctaggccaaggaggcaaaggcctgtgttggat
cctattaatgctagtagaagaaatgaagaagagagctataaaaaggggttgcacgagaaa
cttgaattgtctgagactttgattaacgatttgcagtctgaggttttggctttgaaggta
gaattggataaagcgaatggcttgaaccaagagctcgagttgcagaacaagaagctcact
gaggatcttgctgctgctgaagctaaggtttcagctcttaacactcgtcaccagtcgaag
gagtctgttggagagcaccagaggccaagatttaaggacattcagaaacttattgccatc
aaattggaaaactcaccagttaagaaggaagcaatcaatggaccaagtaaagttaaaacc
ccacagtcaccaccaccaccaccagtaccacgtttcatatccaaagctgatgttgcagaa
aggaaggctccaacttgtccatccttgatgccacctccacctccaccacccctaccccca
atgcggcctctagcaagagcaactactgctcctaaaactccagcaattgtagaattctat
aattcaataagaaagcaagagggtaagagagattctccaggactgcggagtcagtataaa
ccagagaaaactagtgcacacagcagcatagttggagagatccaaaatcgctccacacat
ctgttagctataaaagcggacattgaaacaaagggtgatttcatcaatggtcttattcag
aaagtgctagctgcagcttatacagatattgaggatgtcttaaaattcgtggattggctt
gacggtgaactctcatctttggctgatgaacgagctgtgttaaagcatttcaagtggccg
gagaagaaagcagatgcaatcagagaagcggctatagaatatcgtggccttaaactatta
gaaagtgagatatcttcctttaaggatgaatctaataatccatgtggaactgccttgaaa
aagatggctgtcttacatgacaagtcagagcgaagcattcaaaagctgattaaacttaga
aactccgttatgaactcttaccaggcttggaagattccaactgattggatgcttgattcg
ggaattgtaagcaagataaagcaggcttctatgaggctggcaaagatgtacatgaagaga
gtgataacagaacttgaattggcccgtaattctgagagagaatgcaatcaagaagctctc
ctgcttcaaggtttgcattttgcatatagggctcaccagtttgctggatgtcttgattca
gaaacaatgtgtgcttttgaagagataagacagcgggttccgggacacctaggaggatct
cgagaattactagctgccataccatcatcatga
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