Populus trichocarpa (black cottonwood): 7496880
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Entry
7496880 CDS
T01077
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
Thi4
AlaDh_PNT_C
DAO
Pyr_redox_2
FAD_binding_3
FAD_binding_2
GIDA
HI0933_like
Lycopene_cycl
Pyr_redox
ThiF
MurD-like_N
FAD_oxidored
Shikimate_DH
ELFV_dehydrog
Motif
Other DBs
NCBI-GeneID:
7496880
NCBI-ProteinID:
XP_002300664
UniProt:
B9GQ41
LinkDB
All DBs
Position
2:805469..808171
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AA seq
795 aa
AA seq
DB search
METTAEPPQDPSDNANDVVSEDSSPETDLNDHQNSPETILPPSSETQSPLPNTILDAPVS
DSQDDSSDPIQPPQNPNSTFPAPPPKKRRRRKRFFTEINGNPPFRRHRIGGGLSKEVDVE
ALIAISVGFPVDSLTEEEIEANVVSTIGGTEQANYIVVRNHILSRWRSSVSVWLTRDHAL
ESIRAEHKALVDSAYNFLLQHGYINFGVALSIKEAQLKLNEGVERANVVVVGAGLAGLVA
ARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVVAAADLGGSVLTGINGNPLGVLARQM
GLPLHKVRDICPLYLPDGKAVDSEIDSRIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGT
ALEAFRHVYKVAEDPQELMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIP
GGNDTFVRELAKDLPIFYEKTVESIRYGVDGVIVYAGGQGFRGDMVLCTVPLGVLKKGSI
EFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFFLFYSY
SSVSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIFHPKGIVVPDPVQSVCTRWG
KDCFTYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAA
NILRVANRRSLSVIDKVNNSLEEIDDLNELYDTPNLKFGSFSILFDPRSNDGESLSLLRV
KFQGGESDSCFLCLYGLISRKQAVELSELQDDGKRMEMLYNNFQIRLVGRKGLPNAGESL
LTYIKEARSKLNVGN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccgctgaacctcctcaggacccctccgataatgcaaacgatgtcgtttcc
gaggactcatcaccagaaaccgacctcaacgaccaccaaaactcgccggaaaccatcctc
ccaccttcatctgaaacccagtctccacttcccaatacaatactcgacgctccagtttca
gactcccaagacgactcttctgaccccatacagccaccccaaaaccctaactccacattt
cctgctccacctcccaaaaaacgacgccgtagaaaacgcttctttaccgaaatcaacggc
aatccccccttccgccgccacagaattggcggcggtctctcaaaagaagtcgatgtcgaa
gcattaatagcgatctccgtcgggtttcctgtcgattcgttaactgaagaagaaattgaa
gctaacgtggtgtctaccattggcggcacggagcaagctaattatattgtcgtgagaaac
catattcttagtcgctggagatccagtgtctctgtttggttaacgcgtgatcatgcgctc
gagtcgattcgggccgagcacaaagccttagttgattctgcttataattttctgctacaa
catggctacattaactttggcgtggcgctgtctattaaagaagcgcagttgaaattaaat
gagggagtggagagagccaatgtggttgttgtgggtgcaggactcgcggggttggttgcg
gcgaggcagctaatggctatgggttttaaggttgttgttttggaagggagggctcggccg
ggtgggcgtgtgaagactatgattttgaagggggaaggagtggtggctgcggcggatctt
ggtgggagtgttctcactggaataaatggaaatccacttggagttctagcgaggcaaatg
gggttgccattgcataaggtgagagatatttgccctttgtatttgccggatgggaaggct
gttgattccgagattgattctaggatagaggcttcttttaataagttattagatagagtt
tgtaagcttagacaggctatgatcgaggaagttaaatctgtagatgttaatttagggacc
gctcttgaagcatttaggcatgtttataaggtggctgaggatccacaagagctaatgtta
ttaaattggcatcttgcgaatttggaatatgcgaatgcttcattaatgtctaatttgtct
atggcatattgggatcaggacgatccttatgaaatggggggtgatcattgttttattcca
ggaggtaatgatacttttgttagagagcttgcgaaggaccttccgattttctatgagaag
acggtggagagtataagatatggggttgatggggttattgtttatgcgggtggacagggg
ttccgtggggatatggtgctttgcaccgttcctttgggtgtgcttaagaagggatcaatt
gaattcgtccccgagcttccacaaagaaagaaagatgcaattcaaagactaggatatggg
ttactaaataaggtggcgttattgtttccctataatttttggggtggagaaattgataca
tttggtcatttgacagaagatccaagcatgagaggcgagttttttctgttttatagctac
tcatctgtttcagggggtgctcttttaattgctcttgttgctggggatgctgcggttaag
tttgagacaatgtctccagtggagtctgtgaaaagggtccttggcatattgcgaggtatt
ttccatccaaaagggattgttgttccagatccagttcaatcggtttgcactcgctgggga
aaagattgcttcacgtatggatcttattcatatgttgcagtggggtcttcaggagacgat
tatgatattcttgctgagagcgtgggggatggaagggttttctttgcaggagaggcgaca
aacaaacagtatccagcaacaatgcatggagcttttcttagtgggatgagagaggctgct
aatatattgagagtggccaacagaaggtcattatctgtgattgacaaagtaaataatagc
cttgaggaaattgacgatcttaatgaattatatgacacccctaatctgaaattcgggagc
ttctctattttgtttgatcccaggtcaaatgatggggaatctctgtcattgttgagggtc
aaattccaaggaggagaatcagattcttgttttctatgtctttatggtttgatttctagg
aagcaggctgttgaacttagtgagctacaagacgatggaaagaggatggaaatgctgtat
aataactttcagataaggttagttggaaggaaaggtttgcctaatgctggggaatctctt
ctaacatacatcaaagaggctagatccaaactaaatgtagggaattga
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