Populus trichocarpa (black cottonwood): 7497609
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Entry
7497609 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC7497609
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DDE_Tnp_4
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
7497609
NCBI-ProteinID:
XP_052309614
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Position
6:complement(12900247..12908534)
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AA seq
1366 aa
AA seq
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MNRIVDQINYPSCGVSGASVDGAGDDSNGNDSDDSNDDDDDDDADIDGDSDDDDAFIIRR
HFDREKLNLCTAGAINAYINYMYKEPCMVSYNTGMRWLTEVLRGHWKRSVNMFRMDATTL
LSLCTDLETHHGLKPSRRMSVIEKVAMFLFTIAVGASNRQVQERFQHSGETVSRCFKEVL
KSLRLFAVEIIKPVDPQFTSTPREIAMNPRFMPHFKNCVGAIDGTHVRACVPAANQIPFI
GRKGVPTQNVMAACSFDMQFMFVWAGWEGSAHDTRIFLEAIDNSTINFPKPPEGKYYLVD
AGYPNEYGYLGPYKARGITSKNLDVVDNQVRWRILQNMPAYPYKTQVEIVVASMALHNYI
RRRSQDDAVFSEYDRNPNLIPDDFLPDTVQASAVQGSQRPSRMDFDEGKPHTKSHSYGAL
LPLLHFITEPSSSPATKPLSITFKFTTYCPSNRTVQVHAAKSKRKPKPXFLEQIHHKWSL
KLTSTRDKFPWQEQEQQQQQQQEEEEEEEEEDIKEVDAVPSVSDTVSFNLPNRLTTPPWI
HGATPKQAHFDYQPRKGDNSIHGVFENREDNVVNGGYFCFQLPEAKEIKDCSVHRYAENR
EEDNAEEDSREDNVANKKESVGKKINCNLNKFKDKHYYNSVELPGDKEKSIVTDLNDVVS
LTEKPLMVTMEILAILRSVMMVIVIHLKFVMQGFKWVVSVTKKQLGDFENVEVSNNGVSN
SNELPWKRTSGLDSLGEDKSRKKSNTDLAERMLPEHELKRLRNVALRMLERIKVGATGIT
QDLVDAIHEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSGSSVVXYRGTTY
KFQCVQSYTKQNEAGMDVLQYAEEATNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEE
LMDFSELNHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKN
TTNFRRLARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEEL
KRLTGGTLLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIGS
SVKTTKGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAK
GKLKKSEKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTI
ENMHLHWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNY
MRPRAMRPENLLTRRQALARSVELQRYEALKHHITDLQERIELVTSELEEMEADKKSEVY
KALYSKFDDASILNEDEEGEEEPILKVQYPNSEEDKLEDVPVYDSS
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggattgtagatcaaattaattatcctagttgtggagttagtggtgcttcagtt
gatggtgccggagatgatagtaatggaaacgactccgacgacagtaatgacgacgacgat
gatgatgatgccgacattgacggtgatagtgatgatgacgatgcatttattataaggagg
cattttgatagggaaaaattaaatttatgcacagctggagctataaacgcgtatattaat
tatatgtataaagaaccatgtatggtttcctataacacagggatgcgttggttgacggag
gttttaagaggtcattggaaacgaagtgttaacatgttcaggatggacgcaacaactttg
ttgagtttgtgcaccgacttggaaacgcaccatggcttaaaaccgtcaagaagaatgagc
gttattgaaaaggtggcaatgtttctatttacaatagcagttggggcgtcaaatagacaa
gtgcaggaaagattccagcattcaggtgaaactgttagtagatgttttaaagaagtgctt
aaatcattacgtttgtttgctgtagaaatcataaaaccagtagatccacaatttacgagc
acaccaagagaaattgctatgaatccaagatttatgccacatttcaagaattgtgttggt
gcaattgatggaacacatgttcgtgcatgcgtaccagctgcaaatcaaattccatttatt
ggaagaaaaggtgtaccaacacaaaatgtaatggccgcttgtagtttcgacatgcaattc
atgttcgtgtgggcaggatgggaaggcagtgcacacgatactcgtatttttctggaggct
attgacaatagcactatcaactttccaaaacctccagaaggaaaatactatttggttgat
gctggatatccaaacgagtatggatatttgggtccctacaaagcgagaggtatcacttcc
aagaatttagacgtcgtggacaaccaagtgaggtggagaattttgcaaaacatgcctgct
tatccatacaaaacacaagttgaaattgtagttgcatcaatggcactacataattatatt
agaaggagatcgcaagatgatgcagttttttctgagtatgatcgcaaccccaatttgatt
ccagatgactttttgcctgatactgttcaggcttcggccgttcaaggctcacagaggcct
tcacgtatggattttgatgaaggtaaacctcacaccaagagccacagctatggcgctctc
cttccactcttgcatttcatcactgaaccctcttcttctccagccacaaaacccctctcc
atcacttttaaattcactacttactgtccttctaatcgcacagttcaggttcatgcagct
aagtctaagagaaagcccaagcctnagtttcttgaacaaattcaccataaatggtctctc
aaactcacttcaacaagagacaagtttccctggcaagaacaagaacaacagcaacaacaa
caacaagaagaggaagaggaagaggaagaggaagacataaaagaagttgatgcagtacca
tccgtgagtgatactgtgagtttcaatttaccaaatcgcttaactacacctccttggatt
catggagccacgcccaaacaagcccatttcgattatcaacctagaaaaggagataactct
attcatggggtttttgagaatcgtgaagataatgttgtaaatgggggttatttctgtttt
cagttaccagaagctaaggagataaaagattgttctgttcataggtatgcggagaatcgt
gaagaagataatgccgaagaagatagtcgtgaagataatgttgctaataaaaaagaaagt
gtaggaaagaaaattaattgcaatttaaacaaatttaaggacaaacattattataattca
gttgagttaccaggagataaggagaagtcaatagttacggatttaaatgatgtggtttcg
ctcactgagaaacctttgatggtgacgatggagattttggcaatattgaggtctgtaatg
atggtcattgtgattcatttgaaatttgtcatgcaaggattcaaatgggtagtttctgtg
actaagaaacaacttggggatttcgaaaacgtcgaggtttctaataatggtgttagtaat
tcaaatgagttgccatggaagcgaacaagtggactagactctttgggagaagataagagt
aggaagaagagcaacacggatttggcagagagaatgttgcctgaacatgagttgaagagg
ctaaggaatgtggcattgaggatgcttgagaggataaaagttggggccacaggcattacg
caggatttggtggatgccattcatgagaagtggaagctggatgaagtggtgaagttgaag
tttgaatggccgctgtcatgcaacatgaaaaggacacatgagattttggagagtagaact
ggaggtttgattatatggagatcaggcagttcagtggtantgtacagaggaacaacctac
aaatttcaatgtgtacagtcatataccaagcaaaatgaggctggtatggatgttctgcaa
tatgcggaagaagcaactaatagtgctactagcagtgcaggaatgaaggacttggctaga
actatggaatcaattatacctgatgctgctaagtatttaaaggatctatctcaagaagaa
ctcatggacttcagtgaactcaaccatttgttagatgagttgggtccacggtataaagac
tggtgtggtcgtgagccattgcctgttgatgcagacttgcttcctgctgtggttcctgga
tataaatctccactcagacttcttccttatggggtaaaaccttgtttaagcaacaagaat
acaacaaatttccgcaggcttgctagaacaacacctcctcattttgtgcttggaaggaac
agggaactgcaaggtttggcaaatgctatggtgaagctatgggaaagaagtgctattgca
aagatagccatcaaacgtggagtacagtatacacgtaatgagattatggcggaagaactc
aagaggttgacagggggaacactgctttctagaaacaaggagtacatcgtattttacagg
ggtaatgactttttgccacctgttattaatgagacactgaaagagaggaggaaactagct
ttcctctatcaagatgaagaagatcaagcccgtcagatgacctcagcctttattggatca
agtgtcaaaactactaaaggccccttggttgctggaacactcgttgaaactgtggcagct
atctctcgctgggggaaccaaccaagcagtgaagatgtggaggaaatgataagagattca
gctttggctagacatgcttcattagtgaaacatctcgagaataaactagctcaggcaaaa
ggaaaactcaaaaaatctgagaaggatctggcaaaagtacaggagaatctggaaccgact
gaactcccaacagatctggaaaccataagtgatgaggagaggttcttgttccgtaagatt
ggtctgagtatgaaaccctatctctttctagggaggcgaggtgtctttgatggtaccata
gaaaatatgcacttgcactggaagtatcgtgagttggtgaagataattgtggaacgaaaa
ggtattgcacaagtcaagcatattgcaatttctttggaggctgagagtggtggtgtatta
gtctctgtggatagaactacgaaaggttatgccataattgtctatcgtgggaagaattat
atgcgcccccgggcaatgagacctgagaatttattgacgaggaggcaggcattggccaga
tcagtggaacttcagagatatgaggctctgaagcatcatatcacagatttacaggaaaga
attgagttggtcacgtctgaacttgaggagatggaagctgacaagaaatctgaagtgtac
aaagccttgtactcaaagtttgatgatgcttctattctcaatgaagatgaagagggtgaa
gaagagcctatcttgaaagtacagtaccctaacagtgaggaggacaagctagaagacgta
ccagtctatgattccagctga
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