Populus trichocarpa (black cottonwood): 7498098
Help
Entry
7498098 CDS
T01077
Name
(RefSeq) transcriptional regulator DEF1 isoform X2
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1421
Fmp27_WPPW
DUF4363
V_ATPase_I
FAM76
Motif
Other DBs
NCBI-GeneID:
7498098
NCBI-ProteinID:
XP_002325597
UniProt:
B9IQU2
LinkDB
All DBs
Position
19:13317781..13322721
Genome browser
AA seq
537 aa
AA seq
DB search
MASGSSGRANSGSKGFDFGTDDILCSYEDYGTNNQDSSNGSHSDPVIGSNSSKDFHKSKM
TRSSVYPASSYSQPEDSFHFSPDVVSTVEKGMKKHTDNIMRFLEGISSRLSQLELSCYNL
DKAIGDMRSDSIRDNEEADLKLKSLEKHIQEVHRSVQILRDKQELAETQKELAKLQLAQK
EPSSSSQSQSNEEKAPPAASDPKATDNASDIRNQQLALALPHQVAPQQHAPPVPPLSQAP
PQNVTQQQSYYLPPAQLPTPAAPIQHPQNQYLPSDPQYRTPQMQDVSRVAPQPAQPQVNQ
TLQGQQFPQYQQQWPQQLPLQVQPPQQTQPQIKPPSTTAYTPYQPPCQPTNPSPQETLPN
SLPMQVSYSGVPQSLASRADTMPYGYGAGRTAVPQQPRQPSLQQIKGTFGGQHSDAYATA
GPHPGQPPVSAYMVYDGEGGRTHHPPQQSHFPQGGYPPQPAAGTGMLPRHSSPSHFFRNH
PYSDLIEKLVSMGFRGDHAASVIQRMEESGEPVDFNAVLDRLNVQSSGGSQRGGWSG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggtcatcgggtcgggcgaactcgggttcaaagggattcgattttgggacc
gatgacattctctgctcttatgaagattacggtaccaacaatcaagattcatcaaatggg
tctcattcggatcctgtgatcgggtccaattcgagcaaggatttccacaaaagcaaaatg
acaaggtcatcagtgtatcctgctagttcctatagccagccagaggattctttccatttc
agtccagatgttgtctctactgttgagaaaggcatgaaaaaacatactgacaacatcatg
cgttttcttgagggtatcagttcacgactgtcccagttggaattgtcttgctacaacctt
gataaagcaattggagatatgcgttcggattctattcgtgacaatgaggaggcagattta
aaacttaaatctcttgagaagcatattcaagaggtgcacaggtctgtccagatcctaaga
gataagcaagagcttgctgagactcagaaagaattagccaagcttcagcttgcacagaag
gaaccctcttcatcaagccagtcccaatctaatgaggaaaaagcaccaccagctgcctct
gatcccaaagcaactgacaacgcatctgatatacgtaaccagcaattggctcttgctcta
ccacaccaggtagcaccacagcaacatgcaccacctgtgcctccactctctcaagcccca
cctcagaatgtgactcaacagcaatcttattatttgcctcctgcccaattaccaactcca
gcagctccgatccaacaccctcagaaccaatatctaccttctgatcctcagtaccgaaca
ccccaaatgcaagatgtctctagagtggcaccacagcctgcacagccacaagtaaaccag
acgctacaaggccagcaatttcctcagtatcagcaacagtggccccagcagttacctttg
caagtacaaccacctcaacagacacagccccagatcaagcctccatctacaacagcttac
actccctaccaaccaccatgtcagccaacaaatccctctccacaagaaactctgcctaac
agcttgcccatgcaagtttcatattcaggtgttcctcaatccttagctagtcgtgctgac
accatgccatatggatatggagctggaagaacagctgttccacagcaaccacggcaacct
tcacttcagcaaattaagggcacttttggaggacagcacagtgatgcatatgcaactgct
ggacctcacccaggccagcctccagtaagtgcatacatggtctatgatggtgaaggtggg
agaacacaccatccacctcaacaatctcacttcccacagggtggataccctcctcagcca
gctgcaggcacaggtatgctgccccgccattcaagcccttcacacttttttcgtaaccat
ccctacagtgacttgatcgagaaattggtaagcatgggtttccggggtgatcatgctgcc
agcgtgattcagaggatggaggagagtggtgagcctgtggattttaatgctgtgcttgat
aggttgaatgtgcagtcatctgggggttctcagaggggaggatggtcaggttga
DBGET
integrated database retrieval system
