Pseudomonas oryzihabitans: APT59_00640
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Entry
APT59_00640 CDS
T04267
Name
(GenBank) LysR family transcriptional regulator
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
por
Pseudomonas oryzihabitans
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_00640
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LysR family
APT59_00640
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_24
HTH_30
HTH_50
MitoNEET_N
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ALZ82781
UniProt:
A0A0U4WLA0
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All DBs
Position
complement(133147..134043)
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AA seq
298 aa
AA seq
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MSADDLAFFVRLAGHPSLTAAARELGLSLAAVSKRLTALERRLGVQLIRRTTRRLDLTPE
GLRYLEGARPLLTQLEDLEAAVGRPDAPLSGVLNLNATFGFGRRHLAPLLSDFARRHPGL
ELNLHLSSHPVNLLEGPFDLDIRVGEPPDARVIAHRLLDNRRLLCAAPAYLARAGVPESV
ADLARHNCLVLRQDAGDYAVWRFTKAGQHFAQKVRGSLSSNDGEVVVRLALEGHGLILRS
EWDVAELLASGALVPLLTDHEALAAAIYAVHRQQRHVPRRLSELIRHLARELPARLGR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgctgatgacctcgccttctttgtccgcctggccggccaccccagcctgaccgcc
gctgcccgggagctggggctatccctggcggcggtcagcaaacgactcactgcgctggag
cgccgcctgggcgtgcaactgatccgccggactacccggcggctggacctgacgccggag
ggcctgcgctacctggaaggcgcccgtccgctgctgacccagctggaagacctggaggcc
gccgtcggccggcccgacgcgcccctgagcggggtgctcaatctcaatgccaccttcggc
ttcggccgccgccacctggcaccgctgctgtcggacttcgcccgccgccatcccgggctg
gagctcaatctgcatctttccagccatccggtgaacctgctggagggtcccttcgacctg
gatatccgtgtcggcgagccaccggacgcccgggtcatcgcccaccgcctgctggacaac
cgccgcctgctctgcgccgcccccgcctacctggcacgtgccggcgtgccggagagcgtg
gcggacctggcgcggcacaattgcctggtcttgcgccaggacgcgggcgactatgccgtc
tggcgcttcaccaaggccggccagcacttcgcccagaaggtgcgcggcagcctcagcagc
aacgatggcgaggtggtggtgcgcctggcgctggagggccatggactgatcctgagatcg
gaatgggacgtggccgagctgctcgccagcggcgccctggtgccgctgctgaccgatcac
gaggcgctagcggcggccatctatgcggtccaccgccaacagcgccatgtgccgcgccgc
ctctccgagctgatccgccatctggcacgggagctgcccgcgcgtctgggtcgctga
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