Pseudomonas oryzihabitans: APT59_12925
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Entry
APT59_12925 CDS
T04267
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
por
Pseudomonas oryzihabitans
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_12925
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APT59_12925
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALZ85049
UniProt:
A0A0U4XUB0
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Position
complement(2799960..2800949)
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AA seq
329 aa
AA seq
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MSNIRRVAELAGVSVATVSRTLKNPDVVAPATRERVQAAVAAANYRPNGMAVQFRSRRTG
NLVVLVPLIANSFFARVIAGIQQAAQAAGYRVLLCDTAGDERREREYAELVYARQADGVI
QLRAFDPFAGQGDIPPVVNACEVLAEHTWPKVRLDNRAAARCLTEHLLALGHRRIALIKG
PEDSPLTLERLAGYQEALTQAGIALDPGLLHEGDFTLAAGAAAAKALLTLPERPTALFCC
SDEMAIGALQILRRSGVRVPEDISLAGFDDIAFAAYTEPPLTTIAQPAEAFGQRAVAMLL
EVLNGGTPAAREVVLPFELKVRGSTGVCR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatattcgccgggttgccgaattggccggggtatcagtggcgaccgtgtcgcgc
accctgaagaatcccgacgtcgtggcgcctgctacccgcgagcgcgtgcaggccgccgtg
gccgctgccaactatcggcccaacgggatggccgtgcagtttcgctcccgtcgcaccggc
aacctggtggtgctagttccgctgatcgccaacagcttcttcgcccgggtcatcgccggc
atccagcaggcggcgcaggcggccggttatcgggtgctgctgtgcgataccgctggcgac
gaacgccgcgagcgcgaatacgccgaactggtctatgcacgtcaggccgatggggtgatc
cagctccgcgctttcgatccctttgccggccagggcgacataccgccggtagtgaatgcc
tgcgaagtgctcgccgagcacacctggcccaaggtccggctggacaatcgcgccgccgcg
cgctgcctgaccgagcatctgctggcgctcggacacaggcgcattgccctgatcaagggg
ccggaagacagcccgctgaccctggaacggctggccggctaccaggaggcgctgacgcag
gcgggcattgccctggatcctggtctgctgcacgaaggcgacttcaccctggccgctggc
gccgccgcggccaaggcactgctgacgctacccgagcgcccgaccgcgctgttctgttgc
agcgacgagatggcgatcggagcgctgcagatcctgcggcgctccggggtgcgtgtcccg
gaagacatctccctggcggggttcgatgacatcgccttcgctgcctacaccgagccgcca
ctgaccaccattgcccagccggcggaggccttcggccagcgcgcggtggccatgctgctg
gaggtgctcaacgggggtacgccggctgcgcgagaggtggtgttgcccttcgaactgaag
gtgcgggggagcaccggtgtatgtaggtga
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