Polaromonas sp. SP1: DT070_02735
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Entry
DT070_02735 CDS
T05689
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pos
Polaromonas sp. SP1
Pathway
pos02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DT070_02735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pos02022
]
DT070_02735
02035 Bacterial motility proteins [BR:
pos02035
]
DT070_02735
Two-component system [BR:
pos02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DT070_02735
Bacterial motility proteins [BR:
pos02035
]
Pilus system
Twitching motility proteins
DT070_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
VpsR
HTH_30
AAA_16
Torsin
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AYQ27039
LinkDB
All DBs
Position
572899..574353
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AA seq
484 aa
AA seq
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MSTQAPAAQQARILVIDDEPDLRTLYELTLLREGYRVEAAGDLQQARQQLSENRFDAVIT
DMRLPDGLGLELLRDLVTQQRPERCVVITAHGSAENAVEALKAGAFDYLTKPVDLKQFRS
VVASAVQGARQPAAAAKAERNGAEPGIAPLAIPLPVAADAPLILQKLVGESAVMRAVKSR
IVKVAGSMAPVLIQGESGTGKELVARAVHGCSHRAAGPFVAVNCSAIPENLLEAEFFGAR
KGAYTGSAQDRQGYFQAAKGGTLFLDEIGDLPLAMQSKLLRAIQERTVRPLGSPHEDAVD
VRIVSATHKDLSAGVEQGTFRQDLYYRLNVIEILVPALRERREDLPALCKALLSRICQES
GFGMPELTDAVMEQLRARPFNGNVRELENTLHRAVALGDGSELHFDAPAEEHVSVPENLQ
DYLDGQERNILTKVLLETGFNRTAAASRLGLTLRQIRYRIARLNIVTPGSDDPADGLDPA
DDPA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaagcccccgccgcccagcaagcccgcatcctcgtcattgacgacgagccg
gacctgcgcaccctctacgagctgacgctgctcagggaaggctatcgggtggaagctgcc
ggcgacctgcagcaggcccgccagcaactgagtgaaaaccgcttcgacgcggtcatcacc
gacatgcgcctgccggacggcctgggcctcgaattgctgcgcgacctggtgacccagcag
cggccggagcgctgcgtggtcatcacggcgcacggttctgccgaaaatgcggtcgaagcg
ctgaaggccggcgcttttgactacctcaccaagccggtcgacctcaaacagtttcgcagc
gtcgtcgcctcggccgtgcagggcgcgcggcagcccgctgctgccgccaaggccgaacgc
aatggcgcggaaccgggtatcgcccccctcgcgatcccgctgcccgtagccgccgatgcg
cctttgatactgcaaaaactggtcggtgaatcggccgtcatgcgcgccgtgaaatcgcgc
atcgtcaaggtggcgggcagcatggcgccggttttgatccagggagaatcgggcaccggc
aaggaactggtcgcgcgagcggtgcacggctgcagccaccgggcggcaggcccttttgtg
gcagtcaactgcagcgccatccccgagaaccttctcgaagcggagttcttcggcgcgcgc
aaaggggcgtacaccggatcggcacaggaccggcagggctacttccaggcggccaaaggc
ggcaccctgtttctcgatgagatcggcgacctgccgctggccatgcaatccaagctgttg
cgggccatccaggagcgaacggtgcgcccgctgggctccccgcacgaagatgccgtcgat
gtgcgcatcgtcagcgccacccacaaggacctgtccgccggcgtagagcaaggcaccttc
cgccaggacctgtattaccggctcaacgtgatcgagattcttgtgcccgccctgcgcgag
cgccgggaagacctgcccgctctgtgcaaggcactgctttcaagaatctgccaggagtcc
ggcttcggcatgcccgagctgacggacgccgtgatggaacaactgcgcgcgcggcccttc
aacggcaatgtgcgggagcttgaaaacaccctgcaccgggcggtggcgctcggcgacggc
agcgagcttcacttcgatgcgccggcggaagagcacgtctcggttcccgagaacctgcag
gattacctggacgggcaggaaagaaacattcttaccaaggtattgctggaaaccggcttt
aaccgcaccgccgcagccagccggctgggcctgacgcttcgccagatccgctaccggatt
gcccgcctgaacatcgtgacgccgggcagcgacgaccccgccgacggactcgaccctgcc
gatgaccccgcctga
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