Polaromonas sp. SP1: DT070_05720
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Entry
DT070_05720 CDS
T05689
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DT070_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_05720
Enzymes [BR:
pos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DT070_05720
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DT070_05720
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AYQ27571
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Position
1187081..1187947
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AA seq
288 aa
AA seq
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MFKLTSLNLNGIRSAASKGLQDWIAQSMPDCICVQELKAQAADISGRFEEIAGLKGHFHF
AEKKGYSGVGVYTRHEPTDVIVGYGSSEFDAEGRYIELRFDRPGRKHSPKLSIISCYFPS
GSSGEERQAAKFRFLAEFYPRLLALKETRDFVLCGDINIAHQEIDLKNFKGNKKNSGFLP
EERAWMTELLRDAELANEAADELTERTDASVRGGGIVDVYRKLQPTTTDAAYTWWSNRGQ
AYAKNVGWRLDYHLATPAFAALARSEHIYKEQRFSDHAPMSVDYEFKL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattgaccagcctcaacctcaacggtatccgctccgcagccagcaaaggcctg
caggactggatagcacagtccatgccggattgtatttgcgtgcaggagctcaaggcgcag
gcggccgacatcagcggacgcttcgaagaaatcgccgggctgaagggccatttccatttc
gccgagaagaaaggctattcgggcgtcggcgtctacacacgccacgagcccaccgacgtg
atcgtgggctacggctcgagcgaattcgacgccgaaggccgctacatcgagctgcgcttt
gaccggccgggccgcaagcacagccccaagctttcgatcatcagctgctatttccccagc
ggctcgtcgggcgaagagcggcaggcggccaagttccgcttcctggccgagttttacccg
cgcctgctggcgctgaaagaaacgcgcgacttcgtgctgtgcggcgacatcaacatcgcc
caccaggaaatcgatctgaagaacttcaagggcaacaaaaagaacagcggcttcctgccg
gaagagcgcgcctggatgaccgaactcctgcgcgacgccgagctggccaatgaagcagcc
gatgaattgacggagcgcacggacgcctccgtcaggggcggcggcatcgtcgacgtgtac
cgcaagctgcagcccaccaccaccgacgcggcctacacctggtggagcaaccgcggccag
gcctatgccaagaacgtcggctggcgcctggactaccacctggccacaccggcatttgcc
gcactggcgcgcagcgagcacatctacaaggaacagcggttttcagaccacgcgccgatg
agcgtggactatgaattcaagctctga
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